RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 EFCAB11Q9BUY7 163 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 SLC7A5P2Q9GIP4 190 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 NRSN2Q9GZP1 204 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 ILKAPQ9H0C8 392 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 TNFRSF12AQ9NP84 129 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 RNF11Q9Y3C5 154 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 PCDHGA4Q9Y5G9 962 aa19.04■□□□□ 0.64
TRAPPC12-220ENST00000482645 AKAP13Q12802 2813 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 MED19A0JLT2 244 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 WFS1O76024 890 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 OR4F21O95013 312 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 SNUPNO95149 360 aaKnown RBP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 TIAF1O95411 115 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 CLDN9O95484 217 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 MSL3P1P0C860 447 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 PCNAP12004 261 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 PKNOX1P55347 436 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 ERVPABLB-1P60509 514 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 TBCCQ15814 346 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 CPSF6Q16630 551 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 HIST2H2ACQ16777 129 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 WASHC2DQ5SRD0 308 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 HIST2H2AA3Q6FI13 130 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 PWWP2BQ6NUJ5 590 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 LETMD1Q6P1Q0 360 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 TMIGD1Q6UXZ0 262 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 MILR1Q7Z6M3 343 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 ZNF655Q8N720 491 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 CSNK1A1LQ8N752 337 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 MFSD9Q8NBP5 474 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 CCT6BQ92526 530 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 NXPE2Q96DL1 559 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 KCNA7Q96RP8 456 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 NSRP1Q9H0G5 558 aaKnown RBP19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 PNPOQ9NVS9 261 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 ZDHHC2Q9UIJ5 367 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 MSRB2Q9Y3D2 182 aa19.03■□□□□ 0.64
TRAPPC12-220ENST00000482645 GMNCA6NCL1 334 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 C9orf172C9J069 976 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 NDUFS4O43181 175 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 BRINP1O60477 761 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 SRPX2O60687 465 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 SCRG1O75711 98 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ESRRBO95718 433 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ATXN8OSP0DMR3 200 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 FGF5P12034 268 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 FOXA1P55317 472 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 LAPTM5Q13571 262 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 HKDC1Q2TB90 917 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 LIPJQ5W064 366 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 CLEC6AQ6EIG7 209 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ADNP2Q6IQ32 1131 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 GRHL2Q6ISB3 625 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 CDYL2Q8N8U2 506 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ANKRD53Q8N9V6 530 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 WDR34Q96EX3 536 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 THOC1Q96FV9 657 aaKnown RBP19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 SLC46A1Q96NT5 459 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 NTMT1Q9BV86 223 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 DDA1Q9BW61 102 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ASPSCR1Q9BZE9 553 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ULBP3Q9BZM4 244 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 FOXJ2Q9P0K8 574 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ZNF225Q9UK10 706 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 ANGPTL2Q9UKU9 493 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 NCOR2Q9Y618 2525 aa19.02■□□□□ 0.64
TRAPPC12-220ENST00000482645 FFAR3O14843 346 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 GPR42O15529 346 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 ZSCAN9O15535 394 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 P2RX6O15547 441 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 HNF4AP41235 474 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 CASP2P42575 452 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 SCTRP47872 440 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 RPL14P50914 215 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 RELAQ04206 551 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 SF3A3Q12874 501 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 DDX39BQ13838 428 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 TCTE1Q5JU00 501 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 MED27Q6P2C8 311 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 VN1R4Q7Z5H5 301 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 ASPGQ86U10 573 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 OR8K5Q8NH50 307 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 SLC13A3Q8WWT9 602 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 EPN3Q9H201 632 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 NPHS2Q9NP85 383 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 FREM2Q5SZK8 3169 aa19.01■□□□□ 0.63
TRAPPC12-220ENST00000482645 KCNE1BA0A087WTH5 132 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 AZIN1O14977 448 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 ZNF749O43361 778 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 UGDHO60701 494 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 NTRK1P04629 796 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 CAPN1P07384 714 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 ZNF28P17035 718 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 RTP5Q14D33 572 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 LARP7Q4G0J3 582 aaKnown RBP eCLIP19■□□□□ 0.63
TRAPPC12-220ENST00000482645 KANK2Q63ZY3 851 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 CGB2Q6NT52 195 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 ERMP1Q7Z2K6 904 aa19■□□□□ 0.63
TRAPPC12-220ENST00000482645 BPHLQ86WA6 291 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms