RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SESN1Q9Y6P5 492 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 IGLON5A6NGN9 336 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SNX4O95219 450 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 EBLN1P0CF75 366 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CDH1P12830 882 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ALDH3A2P51648 485 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ELAVL3Q14576 367 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PCBP2Q15366 365 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 KLHL12Q53G59 568 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 USP39Q53GS9 565 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 METTL25Q8N6Q8 603 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 TTLL2Q9BWV7 592 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 KLHL1Q9NR64 748 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ZIM2Q9NZV7 527 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF222Q9UK12 451 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 OR10H1Q9Y4A9 318 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 HAT1O14929 419 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 AREL1O15033 823 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 B4GAT1O43505 415 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ATE1O95260 518 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 OXSR1O95747 527 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 LATS1O95835 1130 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PPIBP23284 216 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 CLCN4P51793 760 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 MCCD1P59942 119 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ERVPABLB-1P60509 514 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 OLR1P78380 273 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 SRSF11Q05519 484 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 SLC15A3Q8IY34 581 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF655Q8N720 491 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 GSTO2Q9H4Y5 243 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 INTS7Q9NVH2 962 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 CORO2BQ9UQ03 480 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 COLEC10Q9Y6Z7 277 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 C7orf72A4D263 438 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 H7BY64 318 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PRAMEF12O95522 483 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 GSRP00390 522 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ENGP17813 658 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF140P52738 457 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 EEFSECP57772 596 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 RAB8AP61006 207 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 KCNAB2Q13303 367 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 DDI2Q5TDH0 399 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF776Q68DI1 518 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 TMPRSS11AQ6ZMR5 421 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PRSS58Q8IYP2 241 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 LILRA2Q8N149 483 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 OR4E2Q8NGC2 313 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 DIRAS2Q96HU8 199 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PRAP1Q96NZ9 151 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 EFCAB11Q9BUY7 163 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ING3Q9NXR8 418 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 DNMT3BQ9UBC3 853 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ADAM30Q9UKF2 790 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF232Q9UNY5 417 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 GSTK1Q9Y2Q3 226 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PEX16Q9Y5Y5 336 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 KNTC1P50748 2209 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 LOC100130705A0A1B0GUX0 176 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 RFXAPO00287 272 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 DFNA5O60443 496 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 F11P03951 625 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 CBSLP0DN79 551 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 C6P13671 934 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ITIH1P19827 911 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 CMPK1P30085 196 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 CBSP35520 551 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 IRS1P35568 1242 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ITGA1P56199 1179 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 ANGPT1Q15389 498 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 TMIGD1Q6UXZ0 262 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PTCHD4Q6ZW05 846 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 GPR65Q8IYL9 337 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 SVOPLQ8N434 492 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 IRF2BPLQ9H1B7 796 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 MRPS30Q9NP92 439 aaKnown RBP10.94□□□□□ -0.66
SMPD4-218ENST00000482171 SSR3Q9UNL2 185 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
SMPD4-218ENST00000482171 URADA6NGE7 173 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 HLCSP50747 726 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 DGKEP52429 567 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 EMX2Q04743 252 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 RUNX3Q13761 415 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 HEPACAMQ14CZ8 416 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TPRG1LQ5T0D9 272 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 HLA-DQA1Q5Y7H0 255 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 LETMD1Q6P1Q0 360 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 BHLHB9Q6PI77 547 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 VN1R5Q7Z5H4 357 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 CDK20Q8IZL9 346 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 LMNTD1Q8N9Z9 388 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 OR8H1Q8NGG4 311 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ADAMTS15Q8TE58 950 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 RELTQ969Z4 430 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms