RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TAC3Q9UHF0 121 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 PCYOX1Q9UHG3 505 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 NPIPA1Q9UND3 350 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 CRYL1Q9Y2S2 319 aa8.9□□□□□ -0.98
SMARCE1-210ENST00000481231 IGHV3-20A0A0C4DH32 117 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 A8MUI8 341 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 E7ENX8 843 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 SMAPO00193 183 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 HAT1O14929 419 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 CTAG2O75638 210 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 SEC24DO94855 1032 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TOXO94900 526 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 CCNDBP1O95273 360 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 SLC16A8O95907 504 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 STATHP02808 62 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 CATP04040 527 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 HOXD4P09016 255 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 C8orf89P0DMQ9 161 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ICAM2P13598 275 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 PKMP14618 531 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 CHRM3P20309 590 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 HSD17B2P37059 387 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 NPY2RP49146 381 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ADARP55265 1226 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 AP2B1P63010 937 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TAP2Q03519 686 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 RELAQ04206 551 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 FAM53BQ14153 422 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 KCNJ11Q14654 390 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 SIX1Q15475 284 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 KCTD19Q17RG1 926 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ZNF766Q5HY98 468 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 LANCL3Q6ZV70 420 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ADCK2Q7Z695 626 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 FGD2Q7Z6J4 655 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 CHERPQ8IWX8 916 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 SHISA5Q8N114 240 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TXLNBQ8N3L3 684 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 PPFIBP2Q8ND30 876 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 ZNF480Q8WV37 535 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TCF12Q99081 682 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TUBB6Q9BUF5 446 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 HES7Q9BYE0 225 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 UTP6Q9NYH9 597 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 STMN3Q9NZ72 180 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 TEKT2Q9UIF3 430 aa8.89□□□□□ -0.99
SMARCE1-210ENST00000481231 FAM237BA0A1B0GVD1 139 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 OR2W5A6NFC9 320 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 ZNF839A8K0R7 811 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 TXNDC9O14530 226 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 TSPAN12O95859 305 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 F7P08709 466 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 CLCN7P51798 805 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 ABATP80404 500 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 ALDH6A1Q02252 535 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 MINDY4Q4G0A6 757 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 KRTCAP3Q53RY4 240 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 FCRLBQ6BAA4 426 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 PLAG1Q6DJT9 500 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 KIAA0930Q6ICG6 404 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 PRSS41Q7RTY9 318 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 VN1R4Q7Z5H5 301 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 REXO1L1PQ8IX06 675 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 LRRC56Q8IYG6 542 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 ZZZ3Q8IYH5 903 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 BEST3Q8N1M1 668 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 RNF10Q8N5U6 811 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 GIMAP7Q8NHV1 300 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 METTL21AQ8WXB1 218 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 TRIM51Q9BSJ1 452 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 CLEC4MQ9H2X3 399 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 KLHL1Q9NR64 748 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 ABCF3Q9NUQ8 709 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 SOX13Q9UN79 622 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 DRG1Q9Y295 367 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 MED16Q9Y2X0 877 aa8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-210ENST00000481231 HEATR5BQ9P2D3 2071 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 TCRBV7S3A2A0A539 114 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 INAFM1C9JVW0 142 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 E5RI56 91 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 H0YIG0 161 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 H7BY64 318 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 AP3B1O00203 1094 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 PFDN6O15212 129 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 NSA2O95478 260 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 MYBL2P10244 700 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 OGNP20774 298 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 XCR1P46094 333 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 AVPR1BP47901 424 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 CDK16Q00536 496 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 CUL1Q13616 776 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 TUBA3CQ13748 450 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 CCNG2Q16589 344 aa8.87□□□□□ -0.99
SMARCE1-210ENST00000481231 NDUFA9Q16795 377 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms