RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PCYT1BQ9Y5K3 369 aaPredicted RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 PMF1-BGLAPU3KQ54 211 aa10.42□□□□□ -0.74
VPS52-217ENST00000478934 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
VPS52-217ENST00000478934 SLC16A6O15403 523 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 UGT2B11O75310 529 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 PSIP1O75475 530 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 NADKO95544 446 aaPredicted RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 TGFB1P01137 390 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 GSTM1P09488 218 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 GPX2P18283 190 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 POLR2EP19388 210 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 MAPK1P28482 360 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 BCAP31P51572 246 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 AP1S2P56377 157 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 POLR2LP62875 67 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 GSTM4Q03013 218 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CREMQ03060 361 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CBX3Q13185 183 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 IQCCQ4KMZ1 466 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CDKL4Q5MAI5 379 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 KDM4DQ6B0I6 523 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 GALNT13Q8IUC8 556 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CFAP206Q8IYR0 622 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 TTC29Q8NA56 475 aaPredicted RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 OR5AK3PQ8NH89 298 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 WDR48Q8TAF3 677 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CSGALNACT1Q8TDX6 532 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 BTN2A2Q8WVV5 523 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 TRUB1Q8WWH5 349 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 RORBQ92753 470 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 AP2M1Q96CW1 435 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 C11orf24Q96F05 449 aaPredicted RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 KCNC2Q96PR1 638 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CFHR5Q9BXR6 569 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 OR51B5Q9H339 312 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 KLHL42Q9P2K6 505 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 PLAGL1Q9UM63 463 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 SAMD4AQ9UPU9 718 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 SH3GLB1Q9Y371 365 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 TMED5Q9Y3A6 229 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 NOTCH4Q99466 2003 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 KPNA3O00505 521 aaPredicted RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 FAM20BO75063 409 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ADAM23O75077 832 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 GNRH1P01148 92 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 SEMG1P04279 462 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 RHOP08100 348 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ETFAP13804 333 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 IDSP22304 550 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 TPP2P29144 1249 aaPredicted RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 HPCAL1P37235 193 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 STARD3Q14849 445 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CARTPTQ16568 116 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 CPTPQ5TA50 214 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 LIPJQ5W064 366 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ELMOD1Q8N336 334 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ZNF480Q8WV37 535 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 MAGED4Q96JG8 741 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ZFYVE19Q96K21 471 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 RDH12Q96NR8 316 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 IL17FQ96PD4 163 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 C19orf43Q9BQ61 176 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 NEURL2Q9BR09 285 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 TRIT1Q9H3H1 467 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 TRIM39Q9HCM9 518 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 RLIMQ9NVW2 624 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 THUMPD1Q9NXG2 353 aaKnown RBP10.41□□□□□ -0.74
VPS52-217ENST00000478934 TESMINQ9Y4I5 508 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 PLXND1Q9Y4D7 1925 aa10.41□□□□□ -0.74
VPS52-217ENST00000478934 ABHD14A-ACY1A0A1B0GW23 586 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 M0R3G1 203 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SCAMP2O15127 329 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 CBFA2T3O75081 653 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 ARHGEF15O94989 841 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 XPAP23025 273 aaPredicted RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 KRT20P35900 424 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TRPC1P48995 793 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 NUDT6P53370 316 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SP140Q13342 867 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PCM1Q15154 2024 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 LRRC26Q2I0M4 334 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TRIM16LQ309B1 348 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 BRAT1Q6PJG6 821 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 LIPIQ6XZB0 460 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 GPR155Q7Z3F1 870 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TECPR1Q7Z6L1 1165 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 RASGRP3Q8IV61 690 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 SYTL1Q8IYJ3 562 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 OR8J2Q8NGG1 315 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CHPT1Q8WUD6 406 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 GLYATL1Q969I3 302 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 TAMM41Q96BW9 452 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CNDP2Q96KP4 475 aaKnown RBP10.4□□□□□ -0.74
VPS52-217ENST00000478934 FCRL1Q96LA6 429 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 EMILIN2Q9BXX0 1053 aa10.4□□□□□ -0.74
VPS52-217ENST00000478934 CEP44Q9C0F1 390 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms