RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FBLP22087 321 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PTPN4P29074 926 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 EEF1DP29692 281 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 HNF4AP41235 474 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GCGRP47871 477 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SNRPNP63162 240 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 IRF8Q02556 426 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CHIT1Q13231 466 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 IL10RAQ13651 578 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PRTGQ2VWP7 1150 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ATG9BQ674R7 924 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF517Q6ZMY9 492 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SLCO4C1Q6ZQN7 724 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SHISA6Q6ZSJ9 500 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 RPS27LQ71UM5 84 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PRSS41Q7RTY9 318 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GPR155Q7Z3F1 870 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TDRPQ86YL5 185 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 KLHDC8AQ8IYD2 350 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ANKRD53Q8N9V6 530 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MFSD9Q8NBP5 474 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CAMKVQ8NCB2 501 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 OR4K1Q8NGD4 311 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 COL26A1Q96A83 441 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MOCOSQ96EN8 888 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MMABQ96EY8 250 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 DRC3Q9H069 523 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PRORYQ9H606 182 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 RRAGDQ9NQL2 400 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GPRC5BQ9NZH0 403 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TMEM216Q9P0N5 145 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CTSFQ9UBX1 484 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PADI2Q9Y2J8 665 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MRPS2Q9Y399 296 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 KCNE1BA0A087WTH5 132 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CCDC189A1A4V9 331 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 H2AFYO75367 372 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CREG1O75629 220 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CAPN1P07384 714 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 TUBBP07437 444 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 EPB42P16452 691 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 KRT4P19013 534 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 SCTRP47872 440 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 RELAQ04206 551 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 RGS1Q08116 209 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CDC20Q12834 499 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 GTF2H2Q13888 395 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 DOC2AQ14183 400 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 NDUFA9Q16795 377 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 KRT71Q3SY84 523 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ADNP2Q6IQ32 1131 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 GTF2H2CQ6P1K8 395 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 TMIGD1Q6UXZ0 262 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 COX15Q7KZN9 410 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 GOLGA7Q7Z5G4 137 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 PRSS58Q8IYP2 241 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 KRT78Q8N1N4 520 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 MREGQ8N565 214 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 OR9A4Q8NGU2 314 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ACMSDQ8TDX5 336 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 THAP11Q96EK4 314 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 PTCD3Q96EY7 689 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 NSUN5Q96P11 429 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 C17orf62Q9BQA9 187 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CAPS2Q9BXY5 557 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 GPR87Q9BY21 358 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 CENPHQ9H3R5 247 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF304Q9HCX3 659 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ACSS2Q9NR19 701 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ZFP69BQ9UJL9 534 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 RALYQ9UKM9 306 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 TCFL5Q9UL49 500 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 FARSAQ9Y285 508 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 PTRH2Q9Y3E5 179 aaKnown RBP6.56□□□□□ -1.36
BRCA1-215ENST00000478531 PCDHGA6Q9Y5G7 932 aa6.56□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF860A6NHJ4 632 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 A8MT66 165 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SGK494L7N484 410 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 E2F3O00716 465 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 COPEO14579 308 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 KLK8O60259 260 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PRAMEF4O60810 478 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CNOT3O75175 753 aaKnown RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 GLRA3O75311 464 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ERLIN1O75477 346 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 B3GALT4O96024 378 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 GSTA1P08263 222 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 FURINP09958 794 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 RAB40ALP0C0E4 278 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 SBK3P0C264 359 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF888P0CJ79 500 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-215ENST00000478531 PCNAP12004 261 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 EPORP19235 508 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CD22P20273 847 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 TAC1P20366 129 aa6.55□□□□□ -1.36
BRCA1-215ENST00000478531 CXCR2P25025 360 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms