RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PPP4R1Q8TF05 950 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 SSC4DQ8WTU2 575 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 ANKRD49Q8WVL7 239 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 C19orf60Q96EN9 201 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 MMABQ96EY8 250 aaPredicted RBP15.38■□□□□ 0.05
COL1A1-205ENST00000476387 AGAP4Q96P64 663 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 CRB3Q9BUF7 120 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 YIPF2Q9BWQ6 316 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 DERL2Q9GZP9 239 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 SOX17Q9H6I2 414 aaPredicted RBP15.38■□□□□ 0.05
COL1A1-205ENST00000476387 SYNPO2LQ9H987 977 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 ZDHHC18Q9NUE0 388 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 DYRK1BQ9Y463 629 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 PCDHGA10Q9Y5H3 936 aa15.38■□□□□ 0.05
COL1A1-205ENST00000476387 POLEQ07864 2286 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 FEZF1A0PJY2 475 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 C1QAP02745 245 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 STATHP02808 62 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 ZGLP1P0C6A0 271 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 SLC35G6P0C7Q6 338 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 CCDC166P0CW27 439 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 NPPBP16860 134 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 AVPR1BP47901 424 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 HNMTP50135 292 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 RAB10P61026 200 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 KLC1Q07866 573 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 MRPL49Q13405 166 aaKnown RBP15.37■□□□□ 0.05
COL1A1-205ENST00000476387 CISD2Q8N5K1 135 aaKnown RBP15.37■□□□□ 0.05
COL1A1-205ENST00000476387 CAMKVQ8NCB2 501 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 OR11G2Q8NGC1 345 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 STT3BQ8TCJ2 826 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 MIEF2Q96C03 454 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 BARD1Q99728 777 aaKnown RBP15.37■□□□□ 0.05
COL1A1-205ENST00000476387 WDR77Q9BQA1 342 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-205ENST00000476387 LHPPQ9H008 270 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 TSPYL1Q9H0U9 437 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 ZBTB20Q9HC78 741 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-205ENST00000476387 TRPC4Q9UBN4 977 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 UNC79Q9P2D8 2635 aa15.37■□□□□ 0.05
COL1A1-205ENST00000476387 KCNE1BA0A087WTH5 132 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 SEMA7AO75326 666 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 WISP3O95389 354 aaPredicted RBP15.36■□□□□ 0.05
COL1A1-205ENST00000476387 DDAH2O95865 285 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 HPP00738 406 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 BCL6P41182 706 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 ATP6V0D1P61421 351 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 FAM53BQ14153 422 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 CSHL1Q14406 222 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 EFTUD2Q15029 972 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL1A1-205ENST00000476387 GLE1Q53GS7 698 aaKnown RBP15.36■□□□□ 0.05
COL1A1-205ENST00000476387 RAPH1Q70E73 1250 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 VN1R4Q7Z5H5 301 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 ASPGQ86U10 573 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 CUZD1Q86UP6 607 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 PRSS58Q8IYP2 241 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 ABHD11Q8NFV4 315 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 SLC5A11Q8WWX8 675 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 IFT81Q8WYA0 676 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 TSNARE1Q96NA8 513 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 OR4K3Q96R72 315 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 FMO2Q99518 471 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 UNKQ9C0B0 810 aaKnown RBP15.36■□□□□ 0.05
COL1A1-205ENST00000476387 C14orf105Q9NVL8 296 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 ASF1BQ9NVP2 202 aa15.36■□□□□ 0.05
COL1A1-205ENST00000476387 A0A0A6YYC8 382 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 NCF1BA6NI72 391 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 NCF1CA8MVU1 366 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 I3L1I5 382 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 MAP2K7O14733 419 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 PCDH17O14917 1159 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 OR1F1O43749 312 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 ALOX12BO75342 701 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 FAM155BO75949 473 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 CBX6O95503 412 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 S100BP04271 92 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 NCF1P14598 390 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 ACPPP15309 386 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 MEF2AQ02078 507 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 NR6A1Q15406 480 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 ZKSCAN8Q15776 578 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 ZXDCQ2QGD7 858 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 EIF2S3LQ2VIR3 472 aaKnown RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 TMPRSS11BQ86T26 416 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 THOC6Q86W42 341 aaKnown RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 TCAIMQ8N3R3 496 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 SPATA6LQ8N4H0 392 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 CEP112Q8N8E3 955 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 MFSD9Q8NBP5 474 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 ZCCHC10Q8TBK6 192 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 SLC13A3Q8WWT9 602 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 NEIL2Q969S2 332 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 EPS8L2Q9H6S3 715 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 PELI2Q9HAT8 420 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 MKKSQ9NPJ1 570 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 WWOXQ9NZC7 414 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 PLEKHB1Q9UF11 243 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 DMGDHQ9UI17 866 aaKnown RBP15.35■□□□□ 0.05
COL1A1-205ENST00000476387 C3orf18Q9UK00 162 aa15.35■□□□□ 0.05
COL1A1-205ENST00000476387 SLC22A14Q9Y267 594 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms