RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ANKRD53Q8N9V6 530 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 UBE2E3Q969T4 207 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 ATP6V1E2Q96A05 226 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 SEC16BQ96JE7 1060 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 ACTR8Q9H981 624 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 NDUFS4O43181 175 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 SPAG7O75391 227 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 DCDP81605 110 aaKnown RBP28.17■■■□□ 2.1
HOXB3-208ENST00000476342 RGS1Q08116 209 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 TNFAIP8L3Q5GJ75 292 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 ZNF678Q5SXM1 525 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 C1orf189Q5VU69 101 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 LIPJQ5W064 366 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 ZNF385CQ66K41 422 aaPredicted RBP28.17■■■□□ 2.1
HOXB3-208ENST00000476342 PPP4R1Q8TF05 950 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 C10orf90Q96M02 699 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 CCNL2Q96S94 520 aaPredicted RBP28.17■■■□□ 2.1
HOXB3-208ENST00000476342 C17orf62Q9BQA9 187 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 NOL11Q9H8H0 719 aaKnown RBP28.17■■■□□ 2.1
HOXB3-208ENST00000476342 FER1L5A0AVI2 2057 aa28.17■■■□□ 2.1
HOXB3-208ENST00000476342 LOC101059948A0A1B0GTJ6 334 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 G3V2L1 256 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 STATHP02808 62 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 SERPIND1P05546 499 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 TCN2P20062 427 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 IMPDH1P20839 514 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 ARL1P40616 181 aaPredicted RBP28.16■■■□□ 2.1
HOXB3-208ENST00000476342 HNF4AP41235 474 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 CCNG1P51959 295 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 ST3GAL2Q16842 350 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 GRHL2Q6ISB3 625 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 MYLK4Q86YV6 388 aaPredicted RBP28.16■■■□□ 2.1
HOXB3-208ENST00000476342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.16■■■□□ 2.13e-8■■■■■ 116
HOXB3-208ENST00000476342 ZNF483Q8TF39 744 aaPredicted RBP28.16■■■□□ 2.1
HOXB3-208ENST00000476342 MVB12AQ96EY5 273 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 TMEM237Q96Q45 408 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 C12orf65Q9H3J6 166 aaKnown RBP28.16■■■□□ 2.1
HOXB3-208ENST00000476342 GPN2Q9H9Y4 310 aaPredicted RBP28.16■■■□□ 2.1
HOXB3-208ENST00000476342 CROTQ9UKG9 612 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 ACTL7BQ9Y614 415 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 LAMA5O15230 3695 aa28.16■■■□□ 2.1
HOXB3-208ENST00000476342 ANKDD1BA6NHY2 528 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 C21orf140B9A014 251 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 SUPT7LO94864 414 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 PIM1P11309 404 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 CPA3P15088 417 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 CD22P20273 847 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 DLSTP36957 453 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 TLE3Q04726 772 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 FAM53BQ14153 422 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 PRMT9Q6P2P2 845 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 FAM199XQ6PEV8 388 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 VASH2Q86V25 355 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 EXOC3L1Q86VI1 746 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 ARMC2Q8NEN0 867 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 TCP10LQ8TDR4 215 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 ZBTB9Q96C00 473 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 L3HYPDHQ96EM0 354 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 NSUN5Q96P11 429 aaKnown RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 FAM111AQ96PZ2 611 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 CHST8Q9H2A9 424 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 AKIRIN1Q9H9L7 192 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 SSU72Q9NP77 194 aaKnown RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 SEMA4BQ9NPR2 832 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-208ENST00000476342 KCND3Q9UK17 655 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 CDC14AQ9UNH5 594 aa28.15■■■□□ 2.1
HOXB3-208ENST00000476342 SRRM3A6NNA2 597 aaPredicted RBP28.14■■■□□ 2.1
HOXB3-208ENST00000476342 C9J4A7 227 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 UCNP55089 124 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 NAA20P61599 178 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 CYP4F2P78329 520 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 MED27Q6P2C8 311 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 HDXQ7Z353 690 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 NT5CQ8TCD5 201 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 CT55Q8WUE5 264 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 NTMT1Q9BV86 223 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 FAM117AQ9C073 453 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 DRC3Q9H069 523 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 ZBTB26Q9HCK0 441 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 SSUH2Q9Y2M2 353 aa28.14■■■□□ 2.1
HOXB3-208ENST00000476342 URADA6NGE7 173 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 TYROBPO43914 113 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 CLDN9O95484 217 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 OTCP00480 354 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 CREB1P16220 341 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 CLCQ05315 142 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 COL9A2Q14055 689 aaPredicted RBP28.13■■■□□ 2.09
HOXB3-208ENST00000476342 RBBP7Q16576 425 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 NKAIN1Q4KMZ8 207 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 TMEM214Q6NUQ4 689 aaKnown RBP28.13■■■□□ 2.09
HOXB3-208ENST00000476342 ARHGEF39Q8N4T4 335 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 L3MBTL4Q8NA19 623 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 KCT2Q8NC54 265 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 MACROD1Q9BQ69 325 aa28.13■■■□□ 2.09
HOXB3-208ENST00000476342 IFT80Q9P2H3 777 aaPredicted RBP28.13■■■□□ 2.09
HOXB3-208ENST00000476342 OR7A17O14581 309 aa28.12■■■□□ 2.09
HOXB3-208ENST00000476342 MED26O95402 600 aa28.12■■■□□ 2.09
HOXB3-208ENST00000476342 SERPINA6P08185 405 aa28.12■■■□□ 2.09
HOXB3-208ENST00000476342 LIFP15018 202 aa28.12■■■□□ 2.09
HOXB3-208ENST00000476342 HPDP32754 393 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms