RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 UBE2FQ969M7 185 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 CIDECQ96AQ7 238 aaPredicted RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 IMP4Q96G21 291 aaKnown RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 FUBP3Q96I24 572 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP16-205ENST00000474835 ZSWIM3Q96MP5 696 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 COL21A1Q96P44 957 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 UCK2Q9BZX2 261 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 ABHD16BQ9H3Z7 469 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 VAT1LQ9HCJ6 419 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 PRDM5Q9NQX1 630 aaPredicted RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 AFF4Q9UHB7 1163 aaKnown RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 NUFIP1Q9UHK0 495 aaKnown RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 CYB5R1Q9UHQ9 305 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 NUDT5Q9UKK9 219 aa3.96□□□□□ -1.78
USP16-205ENST00000474835 MRPL11Q9Y3B7 192 aaKnown RBP3.96□□□□□ -1.78
USP16-205ENST00000474835 SCN5AQ14524 2016 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 FAM95CA0A1B0GW59 222 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 WASHC1A8K0Z3 465 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EFCAB7A8K855 629 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 GFRA2O00451 464 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 GAPDHSO14556 408 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 SYN3O14994 580 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 YY2O15391 372 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SNX2O60749 519 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 F11P03951 625 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 F7P08709 466 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CPN1P15169 458 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 WARSP23381 471 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CCND3P30281 292 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 PBX3P40426 434 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TUFMP49411 452 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 STK19P49842 368 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 VASPP50552 380 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ZNF140P52738 457 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ALDH6A1Q02252 535 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 COX10Q12887 443 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 NPRL3Q12980 569 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MLLT11Q13015 90 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 EXOSC2Q13868 293 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ZNF460Q14592 562 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SF1Q15637 639 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 BTBD16Q32M84 506 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 AGAP9Q5VTM2 703 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ZC3H14Q6PJT7 736 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 KIF18BQ86Y91 864 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 RNF139Q8WU17 664 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 HTRA1Q92743 480 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KCNJ9Q92806 393 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EMID1Q96A84 441 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 DPH7Q9BTV6 452 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 C1orf198Q9H425 327 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TMEM30AQ9NV96 361 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CCDC167Q9P0B6 97 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 FBXO40Q9UH90 709 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EGFL7Q9UHF1 273 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 IL20RAQ9UHF4 553 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 C3orf18Q9UK00 162 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ZNF214Q9UL59 606 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 EXO1Q9UQ84 846 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CA5BQ9Y2D0 317 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 PLEKHA6Q9Y2H5 1048 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CARHSP1Q9Y2V2 147 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 A0A1B0GWJ7 208 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CENPXA8MT69 81 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MEN1O00255 615 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KLF4O43474 513 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 HBP1O60381 514 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CSO75390 466 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CLN5O75503 358 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 IGHA1P01876 353 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 DNTTP04053 509 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 PGRP06401 933 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 UROSP10746 265 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 DARSP14868 501 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 UQCRC1P31930 480 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 GPC1P35052 558 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 BCAR1P56945 870 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 VLDLRP98155 873 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MTM1Q13496 603 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KCNAB1Q14722 419 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 GRIN2CQ14957 1233 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CDKN3Q16667 212 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CLVS2Q5SYC1 327 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MEDAGQ5VYS4 303 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ATRAIDQ6UW56 229 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 LBX2Q6XYB7 198 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 RPS27LQ71UM5 84 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CTAGE3PQ8IX95 158 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TEX19Q8NA77 164 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SETD9Q8NE22 299 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 OR5T2Q8NGG2 359 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ARRDC2Q8TBH0 407 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CLEC4CQ8WTT0 213 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 RBPMSQ93062 196 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ZNF426Q9BUY5 554 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SLC22A4Q9H015 551 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 POLR3FQ9H1D9 316 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 EML4Q9HC35 981 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms