RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OR4K1Q8NGD4 311 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 FBXO30Q8TB52 745 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 NETO1Q8TDF5 533 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ADAMTS16Q8TE57 1224 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ZFP90Q8TF47 636 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 GFM2Q969S9 779 aaKnown RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 ZNF764Q96H86 408 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 PYURFQ96I23 114 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 IL17FQ96PD4 163 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 GDF15Q99988 308 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 TBCDQ9BTW9 1192 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ASPSCR1Q9BZE9 553 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PCBD2Q9H0N5 130 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 WDR26Q9H7D7 661 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 AASDHPPTQ9NRN7 309 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PHPT1Q9NRX4 125 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 ZNF282Q9UDV7 671 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 SAMD4AQ9UPU9 718 aaKnown RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 CORO2BQ9UQ03 480 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 SLC17A4Q9Y2C5 497 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 MYRFQ9Y2G1 1151 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 V9GYQ6 96 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 CHD7Q9P2D1 2997 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 A0A1B0GTW7 788 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 DPM1O60762 260 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 GPR37L1O60883 481 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 PCDH8O95206 1070 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 SERPINA1P01009 418 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 C1QCP02747 245 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 MT-ND1P03886 318 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 FUCA1P04066 466 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 ALPLP05186 524 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 HOXC4P09017 264 aaPredicted RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 ZNF23P17027 643 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 PAX7P23759 505 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 PTX3P26022 381 aaPredicted RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 TIE1P35590 1138 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 GSTM5P46439 218 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 SOX9P48436 509 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 MVDP53602 400 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 NR1H2P55055 460 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 EPS8Q12929 822 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 GAB1Q13480 694 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 BIRC2Q13490 618 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 HTR4Q13639 388 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 CNPY1Q3B7I2 92 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 CPTPQ5TA50 214 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 KRT80Q6KB66 452 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 TMEM214Q6NUQ4 689 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 KIAA1211LQ6NV74 962 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 TMIGD1Q6UXZ0 262 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 CBLL1Q75N03 491 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 EIF3MQ7L2H7 374 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 R3HCC1LQ7Z5L2 792 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 SLC9B2Q86UD5 537 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 C17orf64Q86WR6 236 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 LMNTD1Q8N9Z9 388 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 FAM47BQ8NA70 645 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 VPS37AQ8NEZ2 397 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 OR5K1Q8NHB7 308 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 C16orf78Q8WTQ4 265 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 SMPDL3AQ92484 453 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 SH3KBP1Q96B97 665 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 RMND5BQ96G75 393 aaPredicted RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 VPS50Q96JG6 964 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 MSLNLQ96KJ4 702 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 OSBPL10Q9BXB5 764 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 MS4A8Q9BY19 250 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 ZNF717Q9BY31 904 aaPredicted RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 YTHDF1Q9BYJ9 559 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 GABARAPL1Q9H0R8 117 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 TRIT1Q9H3H1 467 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 TPT1P8Q9HAU6 139 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 PREBQ9HCU5 417 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 TRPV5Q9NQA5 729 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 TM7SF3Q9NS93 570 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 UTS2RQ9UKP6 389 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 SCML1Q9UN30 329 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 WBP11Q9Y2W2 641 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 PRKAB1Q9Y478 270 aa9.42□□□□□ -0.9
USP39-214ENST00000474572 MKI67P46013 3256 aaKnown RBP9.42□□□□□ -0.9
USP39-214ENST00000474572 LRP4O75096 1905 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 MYOCOSA0A1B0GUC4 107 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 A0A1W2PQF6 199 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 C10orf142B7Z368 130 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
USP39-214ENST00000474572 ADAM23O75077 832 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 PGM3O95394 542 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 CST1P01037 141 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 TGFB1P01137 390 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 CEACAM5P06731 702 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 FESP07332 822 aa9.41□□□□□ -0.9
USP39-214ENST00000474572 GNAO1P09471 354 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms