RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ZXDC	Q2QGD7	858 aa	Predicted RBP	14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	MINDY4	Q4G0A6	757 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	MROH9	Q5TGP6	573 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	CYS1	Q717R9	158 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	PRSS41	Q7RTY9	318 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	ZNF740	Q8NDX6	193 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	UHMK1	Q8TAS1	419 aa	Known RBP	14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	ANKRD7	Q92527	254 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	CYTH2	Q99418	400 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	AIF1L	Q9BQI0	150 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	EPN3	Q9H201	632 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	ALG9	Q9H6U8	611 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	MKKS	Q9NPJ1	570 aa	Predicted RBP	14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	NINJ2	Q9NZG7	142 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	MKL2	Q9ULH7	1088 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	PCDHGA9	Q9Y5G4	932 aa	Known RBP	14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	HS3ST3B1	Q9Y662	390 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	IKBKG	Q9Y6K9	419 aa		14.06	□□□□□ -0.16
SSR4-208	ENST00000471880	SCN2A	Q99250	2005 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	SCN3A	Q9NY46	2000 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	TRBC2	A0A5B9	178 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	VSTM2B	A6NLU5	285 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	TTLL8	A6PVC2	850 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	IDS	B3KWA1	339 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	SOCS6	O14544	535 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CCNT2	O60583	730 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	H2AFY	O75367	372 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CD1D	P15813	335 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	TFEB	P19484	476 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	VARS	P26640	1264 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	HSPA7	P48741	367 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CDKL1	Q00532	357 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	FAM53B	Q14153	422 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	OR4D1	Q15615	310 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	NADK2	Q4G0N4	442 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	GLE1	Q53GS7	698 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	NXPE4	Q6UWF7	544 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	LAPTM4B	Q86VI4	370 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	ESAM	Q96AP7	390 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	RHBDF1	Q96CC6	855 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	MCMBP	Q9BTE3	642 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	RBCK1	Q9BYM8	510 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	TSPYL1	Q9H0U9	437 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	SPNS1	Q9H2V7	528 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CNOT10	Q9H9A5	744 aa	Known RBP	14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	ZNF160	Q9HCG1	818 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	C14orf105	Q9NVL8	296 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	MAP4K5	Q9Y4K4	846 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	CNTRL	Q7Z7A1	2325 aa		14.05	□□□□□ -0.16
SSR4-208	ENST00000471880	KCNE1B	A0A087WTH5	132 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	POC1B-GALNT4	F8VUJ3	575 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	DPM1	O60762	260 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	RDH16	O75452	317 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	ONECUT2	O95948	504 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	C1QA	P02745	245 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	INHBA	P08476	426 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	RHOXF2B	P0C7M4	288 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	GNAZ	P19086	355 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	CRABP2	P29373	138 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	SLC26A3	P40879	764 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	CASR	P41180	1078 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	GLRB	P48167	497 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	MLLT10	P55197	1068 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	CDC16	Q13042	620 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	AIMP2	Q13155	320 aa	Known RBP	14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	MYBPC3	Q14896	1274 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	TMEM214	Q6NUQ4	689 aa	Known RBP	14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	KIRREL2	Q6UWL6	708 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	TCAIM	Q8N3R3	496 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	AMER3	Q8N944	861 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	ABHD11	Q8NFV4	315 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	METTL21A	Q8WXB1	218 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	MOCOS	Q96EN8	888 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	THOC3	Q96J01	351 aa	Known RBP	14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	RHOXF2	Q9BQY4	288 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	MESP1	Q9BRJ9	268 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	VPS11	Q9H270	941 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	PELI2	Q9HAT8	420 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	NMRAL1	Q9HBL8	299 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	ENAM	Q9NRM1	1142 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	DNAJC11	Q9NVH1	559 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	ACOT9	Q9Y305	439 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	NAALAD2	Q9Y3Q0	740 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	SHANK1	Q9Y566	2161 aa		14.04	□□□□□ -0.16
SSR4-208	ENST00000471880	NSG1	A0A0A6YYJ2	146 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880		H0YIG0	161 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	JRK	O75564	520 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	CDC123	O75794	336 aa	Predicted RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	KLHL18	O94889	574 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	NSA2	O95478	260 aa	Known RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	LTA4H	P09960	611 aa	Known RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	ZNF888	P0CJ79	500 aa	Predicted RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	SLC35E2B	P0CK96	405 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	TYK2	P29597	1187 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	XCR1	P46094	333 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	SNRPN	P63162	240 aa	Known RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	OLR1	P78380	273 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	REEP5	Q00765	189 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	IRF9	Q00978	393 aa		14.03	□□□□□ -0.16

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