RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 KDELC1Q6UW63 502 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 BBS12Q6ZW61 710 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 COX15Q7KZN9 410 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 BZW1Q7L1Q6 419 aaKnown RBP8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 C4orf33Q8N1A6 199 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 SLC25A41Q8N5S1 370 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 PQLC3Q8N755 202 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 HORMAD2Q8N7B1 307 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 LRRC8CQ8TDW0 803 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 C8orf44Q96CB5 159 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAF2Q96CS3 445 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 KLHL29Q96CT2 875 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF354BQ96LW1 612 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 TMEM121Q9BTD3 319 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 PHACTR1Q9C0D0 580 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 KCNJ16Q9NPI9 418 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 DNAJB12Q9NXW2 375 aaKnown RBP8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPHK1Q9NYA1 384 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 UBP1Q9NZI7 540 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 CTSFQ9UBX1 484 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 MCM8Q9UJA3 840 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 NPIPA1Q9UND3 350 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
SYNGAP1-205ENST00000470232 IGHV1-45A0A0A0MS14 117 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 C3orf70A6NLC5 250 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 FAM171A2A8MVW0 826 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 GOLGA8MH3BSY2 632 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 SMAPO00193 183 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 GAPDHSO14556 408 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 BUD23O43709 281 aaKnown RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 CST8O60676 142 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ATP5HO75947 161 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 HEXBP07686 556 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 HOXD4P09016 255 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 CD46P15529 392 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 IGFBP2P18065 325 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 EEF1DP29692 281 aaKnown RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 PDHA2P29803 388 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 RPL22P35268 128 aaKnown RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 MSH2P43246 934 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 SLC18A1P54219 525 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 EIF3EP60228 445 aaKnown RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 KCNJ2P63252 427 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 PMP22Q01453 160 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 PLOD1Q02809 727 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ZNF33BQ06732 778 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 RASA2Q15283 850 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 SLC1A5Q15758 541 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 BBS9Q3SYG4 887 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 DOLPP1Q86YN1 238 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 PRSS58Q8IYP2 241 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 TMEM178AQ8NBL3 297 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 OR5AR1Q8NGP9 310 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 OR5K2Q8NHB8 316 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ACTL9Q8TC94 416 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 PYROXD1Q8WU10 500 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ZUFSPQ96AP4 578 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 TEKT5Q96M29 485 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 RNF157Q96PX1 679 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 RAB3IPQ96QF0 476 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 NRTNQ99748 197 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 MYLK2Q9H1R3 596 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 DLL4Q9NR61 685 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 ST6GALNAC2Q9UJ37 374 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 CDC14AQ9UNH5 594 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 USH1CQ9Y6N9 552 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 MAU2Q9Y6X3 613 aa8.46□□□□□ -1.06
SYNGAP1-205ENST00000470232 FITM1A5D6W6 292 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 A8MUI8 341 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 IDSB3KWA1 339 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 TARM1B6A8C7 271 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 APOL1O14791 398 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 LIN7AO14910 233 aaPredicted RBP8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 SGTAO43765 313 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 EDF1O60869 148 aaKnown RBP8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 BANF1O75531 89 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 DCTN3O75935 186 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 FKBP9O95302 570 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 AP2A1O95782 977 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 ITGAMP11215 1152 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 ITGALP20701 1170 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 MAGP20916 626 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 FBLP22087 321 aaKnown RBP8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 ADSLP30566 484 aaPredicted RBP8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 ALDH3A1P30838 453 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 CHRNB4P30926 498 aa8.45□□□□□ -1.06
SYNGAP1-205ENST00000470232 SKIV2L2P42285 1042 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms