RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RDH16O75452 317 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 ICAM2P13598 275 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 MEF2AQ02078 507 aaPredicted RBP23.11■■□□□ 1.29
PTCH1-210ENST00000468211 BBS9Q3SYG4 887 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 HP1BP3Q5SSJ5 553 aaPredicted RBP23.11■■□□□ 1.29
PTCH1-210ENST00000468211 FCRLBQ6BAA4 426 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 CAMKVQ8NCB2 501 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 SLC13A3Q8WWT9 602 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 MOCOSQ96EN8 888 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 CERS2Q96G23 380 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 WDR83Q9BRX9 315 aaKnown RBP23.11■■□□□ 1.29
PTCH1-210ENST00000468211 RNF32Q9H0A6 362 aa23.11■■□□□ 1.29
PTCH1-210ENST00000468211 ZNF860A6NHJ4 632 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 DNAJB6O75190 326 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 TTC4O95801 387 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 MST1P26927 711 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 ST13P50502 369 aaKnown RBP23.1■■□□□ 1.29
PTCH1-210ENST00000468211 ZNF33BQ06732 778 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 TEDDM1Q5T9Z0 273 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 ABHD17BQ5VST6 288 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 C1QL3Q5VWW1 255 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 CAPN13Q6MZZ7 669 aaPredicted RBP23.1■■□□□ 1.29
PTCH1-210ENST00000468211 ANKRD37Q7Z713 158 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 FJX1Q86VR8 437 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 PALM2Q8IXS6 379 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 MFSD9Q8NBP5 474 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 OR4K3Q96R72 315 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 RBCK1Q9BYM8 510 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 ANKHQ9HCJ1 492 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 STMN3Q9NZ72 180 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 IKZF3Q9UKT9 509 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 NAALAD2Q9Y3Q0 740 aa23.1■■□□□ 1.29
PTCH1-210ENST00000468211 CREBBPQ92793 2442 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 OR5H15A6NDH6 313 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 A8MUI8 341 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 WISP2O76076 250 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 ZRSR2Q15696 482 aaKnown RBP23.09■■□□□ 1.29
PTCH1-210ENST00000468211 INAQ16352 499 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 BTBD16Q32M84 506 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 PLAG1Q6DJT9 500 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 TRMT10BQ6PF06 316 aaKnown RBP23.09■■□□□ 1.29
PTCH1-210ENST00000468211 KIAA0408Q6ZU52 694 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 OR5T3Q8NGG3 340 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 SLCO2A1Q92959 643 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 OLFM1Q99784 485 aa23.09■■□□□ 1.29
PTCH1-210ENST00000468211 CES2O00748 559 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 B3GALT4O96024 378 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 CCND1P24385 295 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 PER3P56645 1201 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 PMP22Q01453 160 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 HECTD2Q5U5R9 776 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 H3F3CQ6NXT2 135 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 ZNF740Q8NDX6 193 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 ABHD11Q8NFV4 315 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 OR4K1Q8NGD4 311 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 OR56A3Q8NH54 315 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 PEX11GQ96HA9 241 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 NPAS2Q99743 824 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 SPNS1Q9H2V7 528 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 LANCL2Q9NS86 450 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 ARL15Q9NXU5 204 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 SLC22A7Q9Y694 548 aa23.08■■□□□ 1.29
PTCH1-210ENST00000468211 MAN1A2O60476 641 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 PRAMEF2O60811 474 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CDC123O75794 336 aaPredicted RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CYC1P08574 325 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 HIST1H2AGP0C0S8 130 aaPredicted RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 HIST1H2ADP20671 130 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 ELK3P41970 407 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 IL2P60568 153 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 AP2B1P63010 937 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 RHAGQ02094 409 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 PDAP1Q13442 181 aaKnown RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CATSPEREQ5SY80 951 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 DUPD1Q68J44 220 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 PCGF5Q86SE9 256 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 GALNT7Q86SF2 657 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 BEST3Q8N1M1 668 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 AFAP1L2Q8N4X5 818 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 GPATCH11Q8N954 259 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 TSLPQ969D9 159 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CFAP36Q96G28 342 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 SNF8Q96H20 258 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 HIST1H2AHQ96KK5 128 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 HIST1H2AJQ99878 128 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 HAUS8Q9BT25 410 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 NAT9Q9BTE0 207 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 H2AFJQ9BTM1 129 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 PPANQ9NQ55 473 aaKnown RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 TRMT1Q9NXH9 659 aaKnown RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 C19orf25Q9UFG5 118 aaPredicted RBP23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CHMP2BQ9UQN3 213 aa23.07■■□□□ 1.28
PTCH1-210ENST00000468211 CTAGE15A4D2H0 777 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 OR1F1O43749 312 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 RASAL1O95294 804 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 SLC35G6P0C7Q6 338 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 GRK3P35626 688 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 CCR8P51685 355 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 TMEM207Q6UWW9 146 aa23.06■■□□□ 1.28
PTCH1-210ENST00000468211 GFRALQ6UXV0 394 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms