RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ABRAXAS2Q15018 415 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 NRF1Q16656 503 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 XKR6Q5GH73 641 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 ADNP2Q6IQ32 1131 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 KRT80Q6KB66 452 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 BLOC1S3Q6QNY0 202 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 CYP2R1Q6VVX0 501 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 ZBTB49Q6ZSB9 765 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 TSPAN14Q8NG11 270 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 PPWD1Q96BP3 646 aaKnown RBP17.9■□□□□ 0.46
CAPN3-209ENST00000466222 SPHK1Q9NYA1 384 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 TAC3Q9UHF0 121 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 POLG2Q9UHN1 485 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 MYRFQ9Y2G1 1151 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 COLEC10Q9Y6Z7 277 aa17.9■□□□□ 0.46
CAPN3-209ENST00000466222 A0A1B0GTW7 788 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 ZNF839A8K0R7 811 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 GPIP06744 558 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 EBLN1P0CF75 366 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 CAPN3P20807 821 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 ATP6V1B2P21281 511 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 PSMA4P25789 261 aaKnown RBP17.89■□□□□ 0.45
CAPN3-209ENST00000466222 GRIA3P42263 894 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 RAB28P51157 221 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 GPR18Q14330 331 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 GK3PQ14409 553 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 PRR23BQ6ZRT6 265 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 SLC15A3Q8IY34 581 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 KLHDC8AQ8IYD2 350 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 SFRP1Q8N474 314 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 ZBTB44Q8NCP5 570 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 ZDHHC1Q8WTX9 485 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 NMD3Q96D46 503 aaKnown RBP17.89■□□□□ 0.45
CAPN3-209ENST00000466222 MPP4Q96JB8 637 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 KIR3DX1Q9H7L2 352 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 CPNE7Q9UBL6 633 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 PCDHGB4Q9UN71 923 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 PCDHGB5Q9Y5G0 923 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 EML5Q05BV3 1969 aa17.89■□□□□ 0.45
CAPN3-209ENST00000466222 DHRS12A0PJE2 317 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 H3BNH8 94 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 AQP9O43315 295 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 AKAP10O43572 662 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ATP6V1B1P15313 513 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 PKLRP30613 574 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 CTSKP43235 329 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 MAZP56270 477 aaKnown RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 HNRNPKP61978 463 aaKnown RBP eCLIP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 IRF8Q02556 426 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 SIM2Q14190 667 aaPredicted RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ELOCQ15369 112 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 IL27RAQ6UWB1 636 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 TMPRSS11BQ86T26 416 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 OR2T11Q8NH01 316 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 CANT1Q8WVQ1 401 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 SH3KBP1Q96B97 665 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 LRRC58Q96CX6 371 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 SPNS1Q9H2V7 528 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ZSCAN32Q9NX65 697 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 GPR45Q9Y5Y3 372 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 KCNE2Q9Y6J6 123 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 KCNE1BA0A087WTH5 132 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 A0A1W2PP18 115 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ANKRD33BA6NCL7 494 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 FXYD1O00168 92 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 PEBP1P30086 187 aaKnown RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 KCNK10P57789 538 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 UBE2IP63279 158 aaKnown RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ARHGAP19Q14CB8 494 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 SHBQ15464 509 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 TBCELQ5QJ74 424 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 PRAMEF13Q5VWM6 474 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 SLCO4C1Q6ZQN7 724 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 TRIM48Q8IWZ4 208 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ZNF740Q8NDX6 193 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 LCN9Q8WX39 176 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 RMND5BQ96G75 393 aaPredicted RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 ZC3H10Q96K80 434 aaKnown RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 C9orf16Q9BUW7 83 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 AIG1Q9NVV5 245 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 CUEDC1Q9NWM3 386 aaPredicted RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 TUBA8Q9NY65 449 aaPredicted RBP17.88■□□□□ 0.45
CAPN3-209ENST00000466222 HEBP2Q9Y5Z4 205 aa17.88■□□□□ 0.45
CAPN3-209ENST00000466222 TIPRLO75663 272 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 PIAS2O75928 621 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 NPPAP01160 153 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 VIPP01282 170 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 UMPSP11172 480 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 CDH1P12830 882 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 GNSP15586 552 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SLC6A2P23975 617 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 FASP25445 335 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 HMOX2P30519 316 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 VPS26BQ4G0F5 336 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 PDCD4Q53EL6 469 aaKnown RBP17.87■□□□□ 0.45
CAPN3-209ENST00000466222 XKR7Q5GH72 579 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 AMIGO2Q86SJ2 522 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 AMIGO1Q86WK6 493 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 PTRH1Q86Y79 214 aaKnown RBP17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SLC25A45Q8N413 288 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms