RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ALAS2P22557 587 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 CXCR2P25025 360 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 SLC18A2Q05940 514 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 IFFO1Q0D2I5 559 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 DOC2AQ14183 400 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 ARHGAP40Q5TG30 622 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 ENDOVQ8N8Q3 282 aaKnown RBP19.34■□□□□ 0.69
SKA3-205ENST00000465471 NT5CQ8TCD5 201 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 SLC13A3Q8WWT9 602 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 FKBP10Q96AY3 582 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 EFCAB11Q9BUY7 163 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 C1QTNF3Q9BXJ4 246 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 SLC26A1Q9H2B4 701 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 NDOR1Q9UHB4 597 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 DCDC2Q9UHG0 476 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 EMCNQ9ULC0 261 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 FARSAQ9Y285 508 aaKnown RBP19.34■□□□□ 0.69
SKA3-205ENST00000465471 TLDC2A0PJX2 215 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 CCDC151A5D8V7 595 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 A8MT66 165 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 C9J4A7 227 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 SMIM24O75264 130 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 GLRA3O75311 464 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 CREG1O75629 220 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 KLF7O75840 302 aaPredicted RBP19.33■□□□□ 0.68
SKA3-205ENST00000465471 SLC35G6P0C7Q6 338 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 EPB42P16452 691 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 GSTM2P28161 218 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 RPS15P62841 145 aaKnown RBP19.33■□□□□ 0.68
SKA3-205ENST00000465471 CHIT1Q13231 466 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 XKR6Q5GH73 641 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 C16orf46Q6P387 395 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 TMIGD1Q6UXZ0 262 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 TRABD2AQ86V40 505 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 IQCKQ8N0W5 287 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 TEX9Q8N6V9 391 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 ZSCAN1Q8NBB4 408 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 KCT2Q8NC54 265 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 CREB3L4Q8TEY5 395 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.33■□□□□ 0.68
SKA3-205ENST00000465471 PHF21BQ96EK2 531 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 MOCOSQ96EN8 888 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 MACROD1Q9BQ69 325 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 DRC3Q9H069 523 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 MKS1Q9NXB0 559 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 PCTPQ9UKL6 214 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 TCFL5Q9UL49 500 aa19.33■□□□□ 0.68
SKA3-205ENST00000465471 NDUFS4O43181 175 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 H2AFYO75367 372 aaKnown RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 ALBP02768 609 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 RPS17P08708 135 aaKnown RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 EEF1DP29692 281 aaKnown RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 CRHR1P34998 444 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 OR1D4P47884 311 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 RPS18P62269 152 aaKnown RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 MC1RQ01726 317 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 IRF8Q02556 426 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 ZNF844Q08AG5 666 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 HYAL2Q12891 473 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 NDUFA9Q16795 377 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 GPR155Q7Z3F1 870 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 GOLGA7Q7Z5G4 137 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 SYVN1Q86TM6 617 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.32■□□□□ 0.68
SKA3-205ENST00000465471 KRT78Q8N1N4 520 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 AFAP1L2Q8N4X5 818 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 TRPV3Q8NET8 790 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 TTLQ8NG68 377 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 SLC6A16Q9GZN6 736 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 ZNF304Q9HCX3 659 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 IFT80Q9P2H3 777 aaPredicted RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 ZNF490Q9ULM2 529 aaPredicted RBP19.32■□□□□ 0.68
SKA3-205ENST00000465471 SLC22A7Q9Y694 548 aa19.32■□□□□ 0.68
SKA3-205ENST00000465471 CCDC88CQ9P219 2028 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 IGLV3-12A0A075B6K2 115 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 NKX2-8O15522 239 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 KATNA1O75449 491 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 CD63P08962 238 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 PIM1P11309 404 aaPredicted RBP19.31■□□□□ 0.68
SKA3-205ENST00000465471 KRT4P19013 534 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 PIK3CGP48736 1102 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 CDC20Q12834 499 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 LAPTM5Q13571 262 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 IL10RAQ13651 578 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 GTF2H2Q13888 395 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 DSG2Q14126 1118 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 SLC9A5Q14940 896 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 RBBP5Q15291 538 aaKnown RBP19.31■□□□□ 0.68
SKA3-205ENST00000465471 GTF2H2CQ6P1K8 395 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 OVCH1Q7RTY7 1134 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 VN1R5Q7Z5H4 357 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 METTL27Q8N6F8 245 aaPredicted RBP19.31■□□□□ 0.68
SKA3-205ENST00000465471 AMER3Q8N944 861 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 ADAMTS17Q8TE56 1095 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 AICDAQ9GZX7 198 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 RHBGQ9H310 441 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 WDR54Q9H977 334 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 CDC14AQ9UNH5 594 aa19.31■□□□□ 0.68
SKA3-205ENST00000465471 CACNA1GO43497 2377 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms