RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 PGGT1BP53609 377 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 CDKN2DP55273 166 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 RELAQ04206 551 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 SP140Q13342 867 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 HECTD2Q5U5R9 776 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 LCTLQ6UWM7 567 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 VN1R4Q7Z5H5 301 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 PDIK1LQ8N165 341 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 PSMF1Q92530 271 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 HAS2Q92819 552 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 CERS2Q96G23 380 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 HAUS8Q9BT25 410 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 SNX12Q9UMY4 172 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 NAALAD2Q9Y3Q0 740 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 NEU2Q9Y3R4 380 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 DYRK1BQ9Y463 629 aa13.07□□□□□ -0.32
RPP40-203ENST00000464646 SPENQ96T58 3664 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 MYO7BQ6PIF6 2116 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 A0A1B0GUH1 482 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 E2F3O00716 465 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 SLC16A5O15375 505 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 LCMT2O60294 686 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 ZG16O60844 167 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 CRYABP02511 175 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 SOX11P35716 441 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 ELK3P41970 407 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 AGTR2P50052 363 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 CCR8P51685 355 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 SNRPNP63162 240 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 OLR1P78380 273 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 OC90Q02509 493 aaPredicted RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 RGS1Q08116 209 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 CSHL1Q14406 222 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 NSDHLQ15738 373 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 PHKG1Q16816 387 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 MSS51Q4VC12 460 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 FAM45BPQ6NSW5 357 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 TMEM207Q6UWW9 146 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 ANKMY2Q8IV38 441 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 FAM45AQ8TCE6 357 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 ZNF354BQ96LW1 612 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 EGFL8Q99944 293 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 NAT9Q9BTE0 207 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 RHBGQ9H310 441 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 KLHL1Q9NR64 748 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 SUCOQ9UBS9 1254 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 SPTAN1Q13813 2472 aaKnown RBP13.06□□□□□ -0.32
RPP40-203ENST00000464646 FLNCQ14315 2725 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 CROCCQ5TZA2 2017 aa13.06□□□□□ -0.32
RPP40-203ENST00000464646 LOC102723996A0A087X1L8 192 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 PRSS44E7EML9 344 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 PRAMEF2O60811 474 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 UNC5CO95185 931 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 GABRB3P28472 473 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 OR4D2P58180 307 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 TAS2R50P59544 299 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 SKP1P63208 163 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 PMP22Q01453 160 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 RBPJQ06330 500 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 ABRAXAS2Q15018 415 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 RBBP5Q15291 538 aaKnown RBP13.05□□□□□ -0.32
RPP40-203ENST00000464646 SFT2D3Q587I9 215 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 DUPD1Q68J44 220 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 TMEM214Q6NUQ4 689 aaKnown RBP13.05□□□□□ -0.32
RPP40-203ENST00000464646 PAPD4Q6PIY7 484 aaKnown RBP13.05□□□□□ -0.32
RPP40-203ENST00000464646 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 ANKRD37Q7Z713 158 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 ATL1Q8WXF7 558 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 CCT6BQ92526 530 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 NR4A3Q92570 626 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 SNF8Q96H20 258 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 LPAR4Q99677 370 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
RPP40-203ENST00000464646 SEC14L3Q9UDX4 400 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 VWA7Q9Y334 891 aa13.05□□□□□ -0.32
RPP40-203ENST00000464646 USP9YO00507 2555 aaPredicted RBP13.04□□□□□ -0.32
RPP40-203ENST00000464646 KCNE1BA0A087WTH5 132 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 WIPF3A6NGB9 483 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 PSMD12O00232 456 aaPredicted RBP13.04□□□□□ -0.32
RPP40-203ENST00000464646 TTI1O43156 1089 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 B4GALT2O60909 372 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 B3GALT4O96024 378 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 NPPBP16860 134 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
RPP40-203ENST00000464646 CASP6P55212 293 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 ARL4CP56559 192 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms