RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-217	ENST00000463672	TDGF1P3	P51864	188 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	CDKN2D	P55273	166 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	ZNF33B	Q06732	778 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	MORF4L2	Q15014	288 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	EXT1	Q16394	746 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	PHKG1	Q16816	387 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	BTBD16	Q32M84	506 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	RBM20	Q5T481	1227 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	MBOAT1	Q6ZNC8	495 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	PRSS41	Q7RTY9	318 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	SLC26A11	Q86WA9	606 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	SLC34A3	Q8N130	599 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	MFSD9	Q8NBP5	474 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	ABHD11	Q8NFV4	315 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	DNAJB8	Q8NHS0	232 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	ZCCHC10	Q8TBK6	192 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	ALKBH8	Q96BT7	664 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	DDX47	Q9H0S4	455 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	PPAN	Q9NQ55	473 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	PLA2G3	Q9NZ20	509 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	HCN3	Q9P1Z3	774 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	ABI3	Q9P2A4	366 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	SH2B3	Q9UQQ2	575 aa		13.42	□□□□□ -0.26
GGA1-217	ENST00000463672	TEX15	Q9BXT5	2789 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	FEZF1	A0PJY2	475 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	SGK494	L7N484	410 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	PRAMEF2	O60811	474 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	RDH16	O75452	317 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	SEC24D	O94855	1032 aa	Predicted RBP	13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	RASAL1	O95294	804 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	TSPAN12	O95859	305 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	STATH	P02808	62 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	NPPB	P16860	134 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	EFNA3	P52797	238 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	PWP1	Q13610	501 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	BBS9	Q3SYG4	887 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	MSS51	Q4VC12	460 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	HECTD2	Q5U5R9	776 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	LANCL3	Q6ZV70	420 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	ANKRD37	Q7Z713	158 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	STRA8	Q7Z7C7	330 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	GPATCH11	Q8N954	259 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	KCT2	Q8NC54	265 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	OR4K1	Q8NGD4	311 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	OR56A3	Q8NH54	315 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	FBXL8	Q96CD0	374 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	ZNF354B	Q96LW1	612 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	TAAR6	Q96RI8	345 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	STMN3	Q9NZ72	180 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	NAALAD2	Q9Y3Q0	740 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	PCDHGB6	Q9Y5F9	930 aa		13.41	□□□□□ -0.26
GGA1-217	ENST00000463672	TRBC2	A0A5B9	178 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	NDUFS4	O43181	175 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	LCMT2	O60294	686 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	BANF1	O75531	89 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	JAK1	P23458	1154 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	SNRPN	P63162	240 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	RGS1	Q08116	209 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	FRG1	Q14331	258 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	ZRSR2	Q15696	482 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	ACER2	Q5QJU3	275 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	TEDDM1	Q5T9Z0	273 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	ZNF787	Q6DD87	383 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	H3F3C	Q6NXT2	135 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	ABHD13	Q7L211	337 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	PDSS2	Q86YH6	399 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	SPNS2	Q8IVW8	549 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	M1AP	Q8TC57	530 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	RELT	Q969Z4	430 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	SNF8	Q96H20	258 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	PDLIM5	Q96HC4	596 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	LPAR4	Q99677	370 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	MACROD1	Q9BQ69	325 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	MMP25	Q9NPA2	562 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	CHMP2B	Q9UQN3	213 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	VWA7	Q9Y334	891 aa		13.4	□□□□□ -0.26
GGA1-217	ENST00000463672	URAD	A6NGE7	173 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	MAGEB17	A8MXT2	336 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	CDK2AP1	O14519	115 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	NDC80	O14777	642 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	OR1F1	O43749	312 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	GALR3	O60755	368 aa	Predicted RBP	13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	MLYCD	O95822	493 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	F10	P00742	488 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	ALOX12	P18054	663 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	IVD	P26440	423 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	COL8A1	P27658	744 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	AHR	P35869	848 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	ELK3	P41970	407 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	DR1	Q01658	176 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	RHAG	Q02094	409 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	RBPJ	Q06330	500 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	ILF2	Q12905	390 aa	Known RBP	13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	CSHL1	Q14406	222 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	ABRAXAS2	Q15018	415 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	NSDHL	Q15738	373 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	MEP1A	Q16819	746 aa		13.39	□□□□□ -0.27
GGA1-217	ENST00000463672	STEAP4	Q687X5	459 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms