RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SIX1Q15475 284 aaPredicted RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 TTLL9Q3SXZ7 439 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 PAPD4Q6PIY7 484 aaKnown RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 C4orf22Q6V702 233 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 GALNTL5Q7Z4T8 443 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 CDH24Q86UP0 819 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 CHERPQ8IWX8 916 aaKnown RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 SLC5A8Q8N695 610 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 AGAP11Q8TF27 550 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 PHF10Q8WUB8 498 aaKnown RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 BAG1Q99933 345 aaPredicted RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 MACROD1Q9BQ69 325 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 ENKD1Q9H0I2 346 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 VPS9D1Q9Y2B5 631 aa19.53■□□□□ 0.72
CPSF7-209ENST00000463244 NIPBLQ6KC79 2804 aaeCLIP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 INTS1Q8N201 2190 aaKnown RBP19.53■□□□□ 0.72
CPSF7-209ENST00000463244 ABOP16442 354 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 HRH2P25021 359 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 CUL1Q13616 776 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 CCNG2Q16589 344 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 SFT2D3Q587I9 215 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 DRICH1Q6PGQ1 229 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-209ENST00000463244 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-209ENST00000463244 TMEM139Q8IV31 216 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 GHDCQ8N2G8 530 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 HORMAD2Q8N7B1 307 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 PRELID2Q8N945 189 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 FAM98AQ8NCA5 519 aaKnown RBP19.52■□□□□ 0.72
CPSF7-209ENST00000463244 PLPP5Q8NEB5 264 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 CHTF18Q8WVB6 975 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 THAP11Q96EK4 314 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 INTS10Q9NVR2 710 aaKnown RBP19.52■□□□□ 0.72
CPSF7-209ENST00000463244 KLHL42Q9P2K6 505 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 MED16Q9Y2X0 877 aa19.52■□□□□ 0.72
CPSF7-209ENST00000463244 ZNF469Q96JG9 3925 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-209ENST00000463244 E9PLN8 166 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 ZNHIT1O43257 154 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 ZBTB14O43829 449 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 SP1P08047 785 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 MPC1LP0DKB6 136 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 TPSB2P20231 275 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 CDK16Q00536 496 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 HSF1Q00613 529 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 RHAGQ02094 409 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 OC90Q02509 493 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-209ENST00000463244 TLE4Q04727 773 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 USP10Q14694 798 aaKnown RBP19.51■□□□□ 0.71
CPSF7-209ENST00000463244 ABRAXAS2Q15018 415 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 TPSAB1Q15661 275 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 NSDHLQ15738 373 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 MEI1Q5TIA1 1274 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 SLC25A25Q6KCM7 469 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 NEPROQ6NW34 567 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 PDSS2Q86YH6 399 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 DOLPP1Q86YN1 238 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 SPNS2Q8IVW8 549 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 LGI4Q8N135 537 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 RNF10Q8N5U6 811 aaKnown RBP19.51■□□□□ 0.71
CPSF7-209ENST00000463244 CAMKVQ8NCB2 501 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 TM4SF19Q96DZ7 209 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 DMRTA2Q96SC8 542 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 LPAR4Q99677 370 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 VKORC1Q9BQB6 163 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 MCCC2Q9HCC0 563 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 ANKHQ9HCJ1 492 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 CCDC177Q9NQR7 707 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-209ENST00000463244 LRFN1Q9P244 771 aa19.51■□□□□ 0.71
CPSF7-209ENST00000463244 TCRBV7S3A2A0A539 114 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 CDK2AP1O14519 115 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 ADAM10O14672 748 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 RDH16O75452 317 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 ENO3P13929 434 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-209ENST00000463244 TAS2R50P59544 299 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 TBPL1P62380 186 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 CSNK1G2P78368 415 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 ACTN3Q08043 901 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-209ENST00000463244 RPS6KA1Q15418 735 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 CYHR1Q6ZMK1 362 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 KCT2Q8NC54 265 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 ZCCHC10Q8TBK6 192 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 KCNJ9Q92806 393 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 TREX2Q9BQ50 279 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-209ENST00000463244 TSGA10Q9BZW7 698 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 LANCL2Q9NS86 450 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 ASB1Q9Y576 335 aa19.5■□□□□ 0.71
CPSF7-209ENST00000463244 NAV3Q8IVL0 2385 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 SLC25A12O75746 678 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 CDC123O75794 336 aaPredicted RBP19.49■□□□□ 0.71
CPSF7-209ENST00000463244 TSPAN12O95859 305 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 F7P08709 466 aaPredicted RBP19.49■□□□□ 0.71
CPSF7-209ENST00000463244 ZNF24P17028 368 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 PAMP19021 973 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 IL10P22301 178 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 SLC26A5P58743 744 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 RNFT1Q5M7Z0 435 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 ZNF468Q5VIY5 522 aaPredicted RBP19.49■□□□□ 0.71
CPSF7-209ENST00000463244 ARMC3Q5W041 872 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 ZNF470Q6ECI4 717 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 C3P1Q6ZMU1 363 aa19.49■□□□□ 0.71
CPSF7-209ENST00000463244 CA5BP1Q8WTZ4 195 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms