RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RNF44Q7L0R7 432 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 STRA8Q7Z7C7 330 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 AMER2Q8N7J2 671 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 PPFIBP2Q8ND30 876 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 OR2L3Q8NG85 312 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 GABPB2Q8TAK5 448 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 STT3BQ8TCJ2 826 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 MAGEC3Q8TD91 643 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ITLN2Q8WWU7 325 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 RELTQ969Z4 430 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 C8orf44Q96CB5 159 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 LINGO1Q96FE5 620 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 VPS39Q96JC1 886 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 RHOJQ9H4E5 214 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 EPS8L2Q9H6S3 715 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZNF160Q9HCG1 818 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 SEMA3GQ9NS98 782 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 OLAHQ9NV23 265 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 NXT1Q9UKK6 140 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 PDE10AQ9Y233 779 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 VWA7Q9Y334 891 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 MAU2Q9Y6X3 613 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 DNAJC13O75165 2243 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 LOC105369274A0A096LPK9 316 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 LOC102723532A0A0G2JNH3 316 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CTAGE15A4D2H0 777 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRSS44E7EML9 344 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 E7ENX8 843 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 JRKO75564 520 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 FAM155BO75949 473 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 FKBP9O95302 570 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CELA2AP08217 269 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 GSTA2P09210 222 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CTAGE8P0CG41 777 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ACPPP15309 386 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 MAGEA4P43358 317 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 RGS4P49798 205 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 TNFSF10P50591 281 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 VSX2P58304 361 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 TAP2Q03519 686 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 SP140Q13342 867 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 PHKG1Q16816 387 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 PPP1R3AQ16821 1122 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZC3H12BQ5HYM0 836 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ATG9BQ674R7 924 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 SP5Q6BEB4 398 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF425Q6IV72 752 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 LRRC8EQ6NSJ5 796 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 TTC23LQ6PF05 361 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CYS1Q717R9 158 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CTAGE6Q86UF2 777 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 PAQR7Q86WK9 346 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CCDC25Q86WR0 208 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CEP97Q8IW35 865 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 MCEMP1Q8IX19 187 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CTAGE4Q8IX94 777 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR4N4Q8N0Y3 316 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 MYO1HQ8N1T3 1032 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 BCORP1Q8N888 145 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 TTC29Q8NA56 475 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ANKRD49Q8WVL7 239 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 SMPDL3AQ92484 453 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 NR4A3Q92570 626 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 SLC22A18Q96BI1 424 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF775Q96BV0 537 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 PDLIM5Q96HC4 596 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 LMF1Q96S06 567 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 GPR22Q99680 433 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 RBBP8Q99708 897 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 CRB3Q9BUF7 120 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 ACAT2Q9BWD1 397 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 NSMCE4AQ9NXX6 385 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 STOX2Q9P2F5 926 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 SH2B3Q9UQQ2 575 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 MTO1Q9Y2Z2 717 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 MRPS2Q9Y399 296 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 HCFC1P51610 2035 aa7.52□□□□□ -1.21
CDC42BPA-210ENST00000462553 AKAP6Q13023 2319 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF407Q9C0G0 2248 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 NAV3Q8IVL0 2385 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 A0A1B0GUH1 482 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 HYKKA2RU49 373 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 TARM1B6A8C7 271 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 MAP2K7O14733 419 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SLC16A5O15375 505 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZBTB14O43829 449 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SYF2O95926 243 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 C8GP07360 202 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRR35P0CG20 571 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PIM1P11309 404 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 MST1P26927 711 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 GMPRP36959 345 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 HSD17B2P37059 387 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 GP5P40197 560 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRSS12P56730 875 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 IL2P60568 153 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 TBPL1P62380 186 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms