RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 NDRG4Q9ULP0 352 aaKnown RBP16.33■□□□□ 0.2
ACTB-207ENST00000462494 ITM2BQ9Y287 266 aa16.33■□□□□ 0.2
ACTB-207ENST00000462494 PCDHGB1Q9Y5G3 927 aa16.33■□□□□ 0.2
ACTB-207ENST00000462494 HSPE1-MOB4S4R3N1 261 aa16.33■□□□□ 0.2
ACTB-207ENST00000462494 RFPL2O75678 378 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 ADH1AP07327 375 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 ELFN1P0C7U0 828 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 CRATP43155 626 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 RPP38P78345 283 aaKnown RBP16.32■□□□□ 0.2
ACTB-207ENST00000462494 MAD2L1BPQ15013 274 aaPredicted RBP16.32■□□□□ 0.2
ACTB-207ENST00000462494 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 OR4K1Q8NGD4 311 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 NDNFQ8TB73 568 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 SPPL2AQ8TCT8 520 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 AP2M1Q96CW1 435 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 SAMD11Q96NU1 681 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 WRAP53Q9BUR4 548 aaKnown RBP16.32■□□□□ 0.2
ACTB-207ENST00000462494 TDP1Q9NUW8 608 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 TBX21Q9UL17 535 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 ZNF451Q9Y4E5 1061 aa16.32■□□□□ 0.2
ACTB-207ENST00000462494 C1orf226A1L170 272 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 M0R3G1 203 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 QSOX1O00391 747 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 SAP18O00422 153 aaKnown RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 RGS10O43665 173 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 PCDH7O60245 1069 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 C9P02748 559 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 OPN1SWP03999 348 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 ACRP10323 421 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 HSD3B1P14060 373 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CSF2RAP15509 400 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 IDSP22304 550 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 HSD3B2P26439 372 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 RRM2P31350 389 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 KRT20P35900 424 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 MASP1P48740 699 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CRYBA2P53672 197 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 VBP1P61758 197 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 KCNJ10P78508 379 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 NPRL3Q12980 569 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 GRIN2CQ14957 1233 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 ANXA8L1Q5VT79 327 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 TSPYL5Q86VY4 417 aaPredicted RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 SYTL1Q8IYJ3 562 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CHTF18Q8WVB6 975 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 SH3YL1Q96HL8 342 aaPredicted RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 GPBP1L1Q9HC44 474 aaPredicted RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 PALMDQ9NP74 551 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 WNT6Q9Y6F9 365 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 KCNE2Q9Y6J6 123 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 SLC5A10A0PJK1 596 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 GABARAPO95166 117 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 TNFRSF1BP20333 461 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 PRLHRP49683 370 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 C21orf58P58505 322 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CXCR4P61073 352 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CAMK2GQ13555 558 aaPredicted RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 CLCA4Q14CN2 919 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 RGS21Q2M5E4 152 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 SPIN4Q56A73 249 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 BTLAQ7Z6A9 289 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 EGFL6Q8IUX8 553 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CCDC71Q8IV32 467 aaPredicted RBP16.31■□□□□ 0.2
ACTB-207ENST00000462494 OR56A3Q8NH54 315 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 C7orf34Q96L11 122 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 TOX2Q96NM4 488 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 CHST8Q9H2A9 424 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 COQ6Q9Y2Z9 468 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 TESMINQ9Y4I5 508 aa16.31■□□□□ 0.2
ACTB-207ENST00000462494 H3BM21 787 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 NPC1O15118 1278 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 CCL5P13501 91 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 TIA1P31483 386 aaKnown RBP eCLIP16.3■□□□□ 0.24e-28■■■□□ 16.6
ACTB-207ENST00000462494 IDUAP35475 653 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 PRMT2P55345 433 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 STARD3Q14849 445 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 MED27Q6P2C8 311 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 ZNF852Q6ZMS4 543 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 Q6ZPB1 254 aaPredicted RBP16.3■□□□□ 0.2
ACTB-207ENST00000462494 AHSA2Q719I0 299 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 OTOP2Q7RTS6 562 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 P2RY8Q86VZ1 359 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 KLHL23Q8NBE8 558 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 MRGPRX3Q96LB0 322 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 KCNC2Q96PR1 638 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 CORO2BQ9UQ03 480 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 ERGIC3Q9Y282 383 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 BOLA2-SMG1P6H3BVE0 249 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 PCDHGA12O60330 932 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 ETFAP13804 333 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 PPIBP23284 216 aaKnown RBP16.3■□□□□ 0.2
ACTB-207ENST00000462494 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
ACTB-207ENST00000462494 DMC1Q14565 340 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms