RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ZNF425Q6IV72 752 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 EMBQ6PCB8 327 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 KLHL35Q6PF15 583 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PIWIL4Q7Z3Z4 852 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 ISCA2Q86U28 154 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 AMIGO1Q86WK6 493 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 CPNE9Q8IYJ1 553 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 Q8N1Y9 231 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 NKAPQ8N5F7 415 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 OR9A1PQ8NGU1 263 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 OR56A3Q8NH54 315 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 WDR36Q8NI36 951 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 RHEBL1Q8TAI7 183 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ADAMTS17Q8TE56 1095 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ZNF480Q8WV37 535 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 EEF1AKMT1Q8WVE0 214 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 SNRNP27Q8WVK2 155 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 UBXN4Q92575 508 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 RAD51AP1Q96B01 352 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ZBTB8AQ96BR9 441 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ZDHHC12Q96GR4 267 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ATXN7L3BQ96GX2 97 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 SEC16BQ96JE7 1060 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 FCRL4Q96PJ5 515 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ATOH8Q96SQ7 321 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 NDNQ99608 321 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 RHOXF2Q9BQY4 288 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 DDA1Q9BW61 102 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PARVBQ9HBI1 364 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 IGSF5Q9NSI5 407 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 SPHK1Q9NYA1 384 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 COPG2Q9UBF2 871 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TRMT6Q9UJA5 497 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 PILRAQ9UKJ1 303 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PDE10AQ9Y233 779 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 MYRFQ9Y2G1 1151 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 TMEM184BQ9Y519 407 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 NBEAQ8NFP9 2946 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 SMG1Q96Q15 3661 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 MED13Q9UHV7 2174 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 DOCK10Q96BY6 2186 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 A0A087WUV0 522 aaPredicted RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 A0A087WV48 116 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 FAM149AA5PLN7 773 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 TRABD2BA6NFA1 517 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 E5RI56 91 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 TAF4O00268 1085 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PLD2O14939 933 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 KIF1CO43896 1103 aaKnown RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 RFPL1O75677 317 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ZBTB11O95625 1053 aaPredicted RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 CATP04040 527 aaKnown RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 SBK3P0C264 359 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 COL6A2P12110 1019 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 JUPP14923 745 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 CD1DP15813 335 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 UGT2B7P16662 529 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ITGB6P18564 788 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 MCM3P25205 808 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 CD82P27701 267 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 CRABP2P29373 138 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PHBP35232 272 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ETV5P41161 510 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ABCG1P45844 678 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 SLC6A12P48065 614 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 RGS4P49798 205 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 SERPINB9P50453 376 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PGGT1BP53609 377 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PMS2P54278 862 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 IL2P60568 153 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 RAB10P61026 200 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 CYP4F3Q08477 520 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 SLC29A2Q14542 456 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 IL11RAQ14626 422 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ZIC1Q15915 447 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ERCC6LQ2NKX8 1250 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 TBC1D25Q3MII6 688 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 SYTL3Q4VX76 610 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 TEX35Q5T0J7 233 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 METTL2BQ6P1Q9 378 aaKnown RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 SPESP1Q6UW49 350 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ETV3LQ6ZN32 361 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 USP53Q70EK8 1073 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 RNF44Q7L0R7 432 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 RAB11FIP2Q7L804 512 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 ADAMTSL2Q86TH1 951 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 LCA5Q86VQ0 697 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 CCDC25Q86WR0 208 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 OOSP2Q86WS3 158 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PROSER1Q86XN7 944 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 MARCH9Q86YJ5 346 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 TRIM48Q8IWZ4 208 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 IQCKQ8N0W5 287 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 LSMEM2Q8N112 164 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 DNAJC22Q8N4W6 341 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 PPM1NQ8N819 430 aa5.51□□□□□ -1.53
VPS36-202ENST00000462289 Q8N9G6 341 aaPredicted RBP5.51□□□□□ -1.53
VPS36-202ENST00000462289 PDPRQ8NCN5 879 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms