RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 SARGQ9BW04 601 aa22.31■■□□□ 1.16
LMBR1-214ENST00000461469 TRIM54Q9BYV2 358 aa22.31■■□□□ 1.16
LMBR1-214ENST00000461469 VN1R1Q9GZP7 353 aa22.31■■□□□ 1.16
LMBR1-214ENST00000461469 MKL2Q9ULH7 1088 aa22.31■■□□□ 1.16
LMBR1-214ENST00000461469 USP9XQ93008 2570 aaPredicted RBP22.31■■□□□ 1.16
LMBR1-214ENST00000461469 ESPL1Q14674 2120 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 ZNF860A6NHJ4 632 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 FAM159BA6NKW6 160 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 TCP11X1B4DZS4 312 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 H0YIG0 161 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 EIF3HO15372 352 aaKnown RBP eCLIP22.3■■□□□ 1.16
LMBR1-214ENST00000461469 PHGDHO43175 533 aaKnown RBP22.3■■□□□ 1.16
LMBR1-214ENST00000461469 RDH16O75452 317 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 IPO13O94829 963 aaKnown RBP22.3■■□□□ 1.16
LMBR1-214ENST00000461469 HEXBP07686 556 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 AVPR1BP47901 424 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 CCR8P51685 355 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 PLTPP55058 493 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 TMEM205Q6UW68 189 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 LANCL3Q6ZV70 420 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 THOC6Q86W42 341 aaKnown RBP22.3■■□□□ 1.16
LMBR1-214ENST00000461469 CISD2Q8N5K1 135 aaKnown RBP22.3■■□□□ 1.16
LMBR1-214ENST00000461469 EFCAB3Q8N7B9 438 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 CAMKVQ8NCB2 501 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 SLC5A11Q8WWX8 675 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 GPAMQ9HCL2 828 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 SLC22A14Q9Y267 594 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 OARD1Q9Y530 152 aa22.3■■□□□ 1.16
LMBR1-214ENST00000461469 LOC102723996A0A087X1L8 192 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 TRBC2A0A5B9 178 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 OR1F1O43749 312 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 FAM155BO75949 473 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 GDF5P43026 501 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 MRPL49Q13405 166 aaKnown RBP22.29■■□□□ 1.16
LMBR1-214ENST00000461469 AGAP7PQ5VUJ5 663 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 NDUFAF7Q7L592 441 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 ZADH2Q8N4Q0 377 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 ANKRD53Q8N9V6 530 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 OR5T3Q8NGG3 340 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 OR51Q1Q8NH59 317 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 ATL1Q8WXF7 558 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 ANKRD7Q92527 254 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 AGAP4Q96P64 663 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 RBBP8Q99708 897 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 AICDAQ9GZX7 198 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 ASF1BQ9NVP2 202 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 NSMCE4AQ9NXX6 385 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 PCDHGA10Q9Y5H3 936 aa22.29■■□□□ 1.16
LMBR1-214ENST00000461469 NSG1A0A0A6YYJ2 146 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 IGHV3-20A0A0C4DH32 117 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 ESYT3A0FGR9 886 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 NDC80O14777 642 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 VPS4BO75351 444 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 PRR35P0CG20 571 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 XCR1P46094 333 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 SCTRP47872 440 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 REEP5Q00765 189 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 SLC7A5Q01650 507 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 LINC00696Q6ZRV3 163 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 C3orf62Q6ZUJ4 267 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 AFAP1L2Q8N4X5 818 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 BRIX1Q8TDN6 353 aaKnown RBP22.28■■□□□ 1.16
LMBR1-214ENST00000461469 GPR22Q99680 433 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 WDR77Q9BQA1 342 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-214ENST00000461469 RBCK1Q9BYM8 510 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 POPDC3Q9HBV1 291 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 CTNNAL1Q9UBT7 734 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 VPS4AQ9UN37 437 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 NAALAD2Q9Y3Q0 740 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 LRRK2Q5S007 2527 aa22.28■■□□□ 1.16
LMBR1-214ENST00000461469 RP1L1Q8IWN7 2480 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-214ENST00000461469 C4orf51C9J302 202 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 NDUFS4O43181 175 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 VARSP26640 1264 aaKnown RBP22.27■■□□□ 1.16
LMBR1-214ENST00000461469 GRK3P35626 688 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 CDKL1Q00532 357 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 POU4F1Q01851 419 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 HYAL2Q12891 473 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 EFTUD2Q15029 972 aaKnown RBP eCLIP22.27■■□□□ 1.163e-7■■■□□ 15.2
LMBR1-214ENST00000461469 FBXO48Q5FWF7 155 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 UBAP2Q5T6F2 1119 aaKnown RBP22.27■■□□□ 1.16
LMBR1-214ENST00000461469 TMPRSS11BQ86T26 416 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 CCDC25Q86WR0 208 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 IQCKQ8N0W5 287 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 CATSPER1Q8NEC5 780 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 PPP4R1Q8TF05 950 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 RHBDF1Q96CC6 855 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 IMMP1LQ96LU5 166 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 ILKAPQ9H0C8 392 aaPredicted RBP22.27■■□□□ 1.16
LMBR1-214ENST00000461469 ZNF700Q9H0M5 742 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 ANKHQ9HCJ1 492 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 LRRC4CQ9HCJ2 640 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 MAP10Q9P2G4 905 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 UTP11Q9Y3A2 253 aaKnown RBP22.27■■□□□ 1.16
LMBR1-214ENST00000461469 SLC22A7Q9Y694 548 aa22.27■■□□□ 1.16
LMBR1-214ENST00000461469 PABPN1LA6NDY0 278 aaKnown RBP22.26■■□□□ 1.15
LMBR1-214ENST00000461469 NCF1BA6NI72 391 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-214ENST00000461469 NCF1CA8MVU1 366 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-214ENST00000461469 TAPBPO15533 448 aa22.26■■□□□ 1.15
LMBR1-214ENST00000461469 RNF224P0DH78 156 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms