RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 BCORP1Q8N888 145 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC44A1Q8WWI5 657 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 POM121Q96HA1 1249 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 OR4K3Q96R72 315 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 CYTH2Q99418 400 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 MIPEPQ99797 713 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 GPAMQ9HCL2 828 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 TAC3Q9UHF0 121 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 OARD1Q9Y530 152 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC88CQ9P219 2028 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 HIVEP1P15822 2718 aa12.99□□□□□ -0.33
SCAMP4-206ENST00000460767 KCNE1BA0A087WTH5 132 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 ZSCAN9O15535 394 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 PHGDHO43175 533 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CNOT3O75175 753 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 OR2B3O76000 313 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 MED26O95402 600 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 ALDOAP04075 364 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 MYBL2P10244 700 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CD1DP15813 335 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CAPN3P20807 821 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CMPK1P30085 196 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC26A3P40879 764 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 EMP3P54852 163 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 DCDP81605 110 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 DLG1Q12959 904 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CDC16Q13042 620 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 AGAP7PQ5VUJ5 663 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 YOD1Q5VVQ6 348 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 LCTLQ6UWM7 567 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 ADAMTSL2Q86TH1 951 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 IFT20Q8IY31 132 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CENPLQ8N0S6 344 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 ABHD11Q8NFV4 315 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 OR4K1Q8NGD4 311 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 DNAJB14Q8TBM8 379 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 IFT81Q8WYA0 676 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 FKBP10Q96AY3 582 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 TSPAN17Q96FV3 270 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 AGAP4Q96P64 663 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 ACAT2Q9BWD1 397 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 PCBD2Q9H0N5 130 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 MRPS30Q9NP92 439 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC22A11Q9NSA0 550 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 OLAHQ9NV23 265 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 NDOR1Q9UHB4 597 aa12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-206ENST00000460767 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 JRKO75564 520 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CCNDBP1O95273 360 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 COX6B1P14854 86 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 STMN1P16949 149 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 MMP11P24347 488 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CCND1P24385 295 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 GCAP28676 217 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 RPA3P35244 121 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 GGT5P36269 586 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 GMPRP36959 345 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 SLC6A12P48065 614 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 KCNC1P48547 511 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CSNK1G2P78368 415 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 SLMAPQ14BN4 828 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 TSNQ15631 228 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ZC3H12BQ5HYM0 836 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 MLIPQ5VWP3 458 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CMC1Q7Z7K0 106 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ISCA2Q86U28 154 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 RHBDF1Q96CC6 855 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 GPR78Q96P69 363 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ZFYVE21Q9BQ24 234 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ARL15Q9NXU5 204 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 IFT80Q9P2H3 777 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 SUCOQ9UBS9 1254 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 CELSR1Q9NYQ6 3014 aa12.97□□□□□ -0.33
SCAMP4-206ENST00000460767 AKAP9Q99996 3911 aa12.96□□□□□ -0.33
SCAMP4-206ENST00000460767 CCDC189A1A4V9 331 aa12.96□□□□□ -0.33
SCAMP4-206ENST00000460767 NPEPPSL1A6NEC2 478 aa12.96□□□□□ -0.33
SCAMP4-206ENST00000460767 ACSL3O95573 720 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms