RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CORO2BQ9UQ03 480 aa5.61□□□□□ -1.51
RNU1-88P-201ENST00000459274 MRPS33Q9Y291 106 aaKnown RBP5.61□□□□□ -1.51
RNU1-88P-201ENST00000459274 POLR3HQ9Y535 204 aaPredicted RBP5.61□□□□□ -1.51
RNU1-88P-201ENST00000459274 AP1M2Q9Y6Q5 423 aa5.61□□□□□ -1.51
RNU1-88P-201ENST00000459274 TRANK1O15050 2925 aa5.61□□□□□ -1.51
RNU1-88P-201ENST00000459274 A0A1B0GTQ1 180 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 FEZF1A0PJY2 475 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR5K3A6NET4 321 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 TLCD2A6NGC4 264 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MRASO14807 208 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 LSM1O15116 133 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 GSTA4O15217 222 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CAPN5O15484 640 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 HRO43593 1189 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 B3GALT2O43825 422 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 PCDH7O60245 1069 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 NRP2O60462 931 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SEMA3DO95025 777 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZBTB11O95625 1053 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 WNT1P04628 370 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 UGT2B7P16662 529 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 PPIBP23284 216 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 PRPH2P23942 346 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MPLP40238 635 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CTSKP43235 329 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SCTRP47872 440 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 AVPR1BP47901 424 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ALDH9A1P49189 494 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 NME5P56597 212 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 RPS13P62277 151 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 TRA2BP62995 288 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CYP4F2P78329 520 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 HMGCS1Q01581 520 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MEF2AQ02078 507 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 RELAQ04206 551 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ACTN3Q08043 901 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 DMTNQ08495 405 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 DMWDQ09019 674 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 C2orf80Q0P641 193 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 NFYCQ13952 458 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 UBAP2LQ14157 1087 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SPIDRQ14159 915 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 AMZ1Q400G9 498 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 C6orf10Q5SRN2 563 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CPTPQ5TA50 214 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 DEPDC1Q5TB30 811 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR4C11Q6IEV9 310 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 NOXRED1Q6NXP6 359 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 BHLHB9Q6PI77 547 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 OGFOD3Q6PK18 319 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 LAYNQ6UX15 382 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 IKBIPQ70UQ0 350 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ASPGQ86U10 573 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SNX32Q86XE0 403 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 FAM129CQ86XR2 697 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 KMT5CQ86Y97 462 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 NRROSQ86YC3 692 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 RASGRP3Q8IV61 690 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ADGRF3Q8IZF5 1079 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 C1orf52Q8N6N3 182 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MFSD9Q8NBP5 474 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR4C6Q8NH72 309 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZFP28Q8NHY6 868 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 PPCDCQ96CD2 204 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MTERF3Q96E29 417 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SPDL1Q96EA4 605 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ITCHQ96J02 903 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MARK4Q96L34 752 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 APOLD1Q96LR9 279 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR4K3Q96R72 315 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 HBEGFQ99075 208 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ECSITQ9BQ95 431 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ACPTQ9BZG2 426 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 TRIM15Q9C019 465 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ARRDC1-AS1Q9H2J1 176 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 RHBGQ9H310 441 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 TCEAL2Q9H3H9 227 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SEMA6CQ9H3T2 930 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 RAD21L1Q9H4I0 556 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CACYBPQ9HB71 228 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 IL21RQ9HBE5 538 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ANKHQ9HCJ1 492 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 DMRT3Q9NQL9 472 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SDR39U1Q9NRG7 319 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 FARSBQ9NSD9 589 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 AIG1Q9NVV5 245 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 LYARQ9NX58 379 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ASIC5Q9NY37 505 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SH3BP4Q9P0V3 963 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 SCHIP1Q9P0W5 487 aaPredicted RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 PHF11Q9UIL8 331 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CROTQ9UKG9 612 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 CDC14AQ9UNH5 594 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 COPG1Q9Y678 874 aaKnown RBP5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZNF780BQ9Y6R6 833 aa5.6□□□□□ -1.51
RNU1-88P-201ENST00000459274 UNC13CQ8NB66 2214 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SCN3AQ9NY46 2000 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 KCNE1BA0A087WTH5 132 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 A0A0J9YVX5 310 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms