RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 C8orf44Q96CB5 159 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 OR4K3Q96R72 315 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 LMF1Q96S06 567 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 PELI2Q9HAT8 420 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 GRHL1Q9NZI5 618 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 MAP10Q9P2G4 905 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 MRPS2Q9Y399 296 aaKnown RBP16.92■□□□□ 0.3
MSH6-207ENST00000456246 KCNE2Q9Y6J6 123 aa16.92■□□□□ 0.3
MSH6-207ENST00000456246 ESPL1Q14674 2120 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 NPEPPSL1A6NEC2 478 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 FFAR3O14843 346 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 GPR42O15529 346 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 OR1F1O43749 312 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 LCMT2O60294 686 aaKnown RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 IL1RNP18510 177 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 SSTR1P30872 391 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 AHRP35869 848 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 GP5P40197 560 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 PGGT1BP53609 377 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 MAT1AQ00266 395 aaKnown RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 RGS1Q08116 209 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 Q0VFX4 171 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 TLR1Q15399 786 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 SYT16Q17RD7 645 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 B3GNTL1Q67FW5 361 aaPredicted RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 SYT10Q6XYQ8 523 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 ZNF572Q7Z3I7 529 aaPredicted RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 OR51Q1Q8NH59 317 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 ZCCHC10Q8TBK6 192 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 NEIL2Q969S2 332 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 OR1F2PQ96R84 312 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 EGFL8Q99944 293 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 AIF1LQ9BQI0 150 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 TUBB6Q9BUF5 446 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 DERL2Q9GZP9 239 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 ZNF700Q9H0M5 742 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 ZFP69BQ9UJL9 534 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 PCDHGA10Q9Y5H3 936 aa16.91■□□□□ 0.3
MSH6-207ENST00000456246 USP9XQ93008 2570 aaPredicted RBP16.91■□□□□ 0.3
MSH6-207ENST00000456246 TCRBV9S1A1TA0A576 114 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 URADA6NGE7 173 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 FAM159BA6NKW6 160 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 CDC7O00311 574 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 NDUFS4O43181 175 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 STATHP02808 62 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 PRR35P0CG20 571 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 GNLYP22749 145 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 TSFMP43897 325 aaKnown RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 XCR1P46094 333 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 SCTRP47872 440 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 AGTR2P50052 363 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 EEF1A2Q05639 463 aaKnown RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 ZNF460Q14592 562 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 MINDY4Q4G0A6 757 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 PRR30Q53SZ7 412 aaPredicted RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 FHL5Q5TD97 284 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 C3orf62Q6ZUJ4 267 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 ABHD13Q7L211 337 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 TCAIMQ8N3R3 496 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 AFAP1L2Q8N4X5 818 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 KCT2Q8NC54 265 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 GPR22Q99680 433 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 RBBP8Q99708 897 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 VN1R1Q9GZP7 353 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 CLK4Q9HAZ1 481 aaKnown RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 ZBTB20Q9HC78 741 aaPredicted RBP16.9■□□□□ 0.3
MSH6-207ENST00000456246 SMYD2Q9NRG4 433 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 AGPAT4Q9NRZ5 378 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 IKZF3Q9UKT9 509 aa16.9■□□□□ 0.3
MSH6-207ENST00000456246 SGK494L7N484 410 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 KLHL18O94889 574 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 UQCRHP07919 91 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 STMN1P16949 149 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 STX2P32856 288 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 UQCRFS1P47985 274 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 PLTPP55058 493 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 ATP6V0D1P61421 351 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 REEP5Q00765 189 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 USP10Q14694 798 aaKnown RBP16.89■□□□□ 0.29
MSH6-207ENST00000456246 ZNF169Q14929 603 aaPredicted RBP16.89■□□□□ 0.29
MSH6-207ENST00000456246 TSNQ15631 228 aaKnown RBP16.89■□□□□ 0.29
MSH6-207ENST00000456246 CDKL4Q5MAI5 379 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 CATSPEREQ5SY80 951 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 MFSD4BQ5TF39 518 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 NXPE4Q6UWF7 544 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 PRSS41Q7RTY9 318 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 CUZD1Q86UP6 607 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 CEP97Q8IW35 865 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 KLHDC8AQ8IYD2 350 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 TRPV3Q8NET8 790 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 DNAJB14Q8TBM8 379 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 NT5CQ8TCD5 201 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 ANKRD49Q8WVL7 239 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms