RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KERAO60938 352 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 RFPL1O75677 317 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 IPO13O94829 963 aaKnown RBP13.86□□□□□ -0.19
USP39-206ENST00000448971 ALDOAP04075 364 aaKnown RBP13.86□□□□□ -0.19
USP39-206ENST00000448971 C2P06681 752 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 SLC35G6P0C7Q6 338 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ITGAXP20702 1163 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 FBLP22087 321 aaKnown RBP13.86□□□□□ -0.19
USP39-206ENST00000448971 OTX2P32243 289 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 SLC26A3P40879 764 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 OR1D4P47884 311 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 GLRBP48167 497 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 DLG1Q12959 904 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 FAM83EQ2M2I3 478 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 FBXO48Q5FWF7 155 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 CATSPEREQ5SY80 951 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 GARNL3Q5VVW2 1013 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 PRMT9Q6P2P2 845 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ASPGQ86U10 573 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ZCCHC10Q8TBK6 192 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.86□□□□□ -0.19
USP39-206ENST00000448971 THAP4Q8WY91 577 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 NXNL1Q96CM4 212 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 THAP11Q96EK4 314 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 DRC3Q9H069 523 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 PELI2Q9HAT8 420 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ZNF304Q9HCX3 659 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 ENAMQ9NRM1 1142 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 IGSF5Q9NSI5 407 aa13.86□□□□□ -0.19
USP39-206ENST00000448971 DOPEY1Q5JWR5 2465 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 HMX2A2RU54 273 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 ESPNB1AK53 854 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 NDUFS4O43181 175 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 OR1F1O43749 312 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CCNT2O60583 730 aaKnown RBP13.85□□□□□ -0.19
USP39-206ENST00000448971 DNAJB5O75953 348 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MED26O95402 600 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 SERPIND1P05546 499 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MYBL2P10244 700 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 GNLYP22749 145 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CNTFP26441 200 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 GDF5P43026 501 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 SLC6A12P48065 614 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 HSPA7P48741 367 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 EMP3P54852 163 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 FOXL2P58012 376 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 REEP5Q00765 189 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CDC16Q13042 620 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 SULT1C3Q6IMI6 304 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MRPL14Q6P1L8 145 aaKnown RBP13.85□□□□□ -0.19
USP39-206ENST00000448971 COX15Q7KZN9 410 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 VN1R4Q7Z5H5 301 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CENPLQ8N0S6 344 aaPredicted RBP13.85□□□□□ -0.19
USP39-206ENST00000448971 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CAMKVQ8NCB2 501 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 GALNT11Q8NCW6 608 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 ABHD11Q8NFV4 315 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 OR2Y1Q8NGV0 311 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 DCAKDQ8WVC6 231 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MVB12AQ96EY5 273 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MMABQ96EY8 250 aaPredicted RBP13.85□□□□□ -0.19
USP39-206ENST00000448971 AIF1LQ9BQI0 150 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 YIPF2Q9BWQ6 316 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 TRIM55Q9BYV6 548 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 MLXIPLQ9NP71 852 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 SLC22A11Q9NSA0 550 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 DNAJC11Q9NVH1 559 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 CTSFQ9UBX1 484 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 ZNF180Q9UJW8 692 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 NXT1Q9UKK6 140 aaKnown RBP13.85□□□□□ -0.19
USP39-206ENST00000448971 CDC14AQ9UNH5 594 aa13.85□□□□□ -0.19
USP39-206ENST00000448971 A0A0A6YYC8 382 aaPredicted RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 TRBC2A0A5B9 178 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 TTLL8A6PVC2 850 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 SYCE1LA8MT33 242 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 I3L1I5 382 aaPredicted RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 UBXN8O00124 270 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 CNOT3O75175 753 aaKnown RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 VPS4BO75351 444 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 GNAZP19086 355 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 AVPR1BP47901 424 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 OCA2Q04671 838 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 PDK4Q16654 411 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 CDKL4Q5MAI5 379 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 SHISA6Q6ZSJ9 500 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 ISCA2Q86U28 154 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 EIF1ADQ8N9N8 165 aaKnown RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 MFSD9Q8NBP5 474 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 UBLCP1Q8WVY7 318 aaPredicted RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 SLC13A3Q8WWT9 602 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 ESAMQ96AP7 390 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 ATOH8Q96SQ7 321 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms