RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 JUPP14923 745 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 MAPK1P28482 360 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CBSP35520 551 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 LMAN2Q12907 356 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 LYPLAL1Q5VWZ2 237 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 TXNDC8Q6A555 127 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 Q6ZNB5 142 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CRIPAKQ8N1N5 446 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CBARPQ8N350 705 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CELF2-AS1Q8N7Q2 184 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 HJURPQ8NCD3 748 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 OR9Q2Q8NGE9 314 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF675Q8TD23 568 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 ELMO1Q92556 727 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 SP140LQ9H930 580 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 GFYI3L273 518 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 MRPS14O60783 128 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 EFEMP2O95967 443 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 HOXB6P17509 224 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 SERPINB1P30740 379 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 DGKEP52429 567 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.37e-7■□□□□ 8.8
POLR1B-209ENST00000448770 RGNQ15493 299 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 P3H2Q8IVL5 708 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 METTL4Q8N3J2 472 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 LILRA3Q8N6C8 439 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 LMNTD1Q8N9Z9 388 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 TXNDC15Q96J42 360 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 MMP27Q9H306 513 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CPNE5Q9HCH3 593 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 SPATA6Q9NWH7 488 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CFAP20Q9Y6A4 193 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 DLGAP3O95886 979 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 ETFAP13804 333 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 VEZF1Q14119 521 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 C1orf52Q8N6N3 182 aaKnown RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 OR5M11Q96RB7 305 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 CTRCQ99895 268 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 CHCHD6Q9BRQ6 235 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 HOXD1Q9GZZ0 328 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 FAM120CQ9NX05 1096 aaKnown RBP13.16□□□□□ -0.3
POLR1B-209ENST00000448770 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 SOCS5O75159 536 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 DOC2AQ14183 400 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 CDKL4Q5MAI5 379 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 DEPDC1Q5TB30 811 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 HEATR4Q86WZ0 1026 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 SPPL2AQ8TCT8 520 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 PLCXD1Q9NUJ7 323 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 FBXL12Q9NXK8 326 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 VPS29Q9UBQ0 182 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
POLR1B-209ENST00000448770 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SERTM1A2A2V5 107 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 A6NL46 340 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 PSMD11O00231 422 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 KMOO15229 486 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 SUV39H1O43463 412 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 C8GP07360 202 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 POU2F1P14859 743 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 IDSP22304 550 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 CASP3P42574 277 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 IRF8Q02556 426 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 IRF3Q14653 427 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 EXOC3L2Q2M3D2 409 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 XKR6Q5GH73 641 aa13.15□□□□□ -0.3
POLR1B-209ENST00000448770 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.3
POLR1B-209ENST00000448770 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms