RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 HOXB6P17509 224 aaKnown RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 GPX2P18283 190 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 MRPS21P82921 87 aaKnown RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 MEF2AQ02078 507 aaPredicted RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 LRRC74AQ0VAA2 488 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 PDE7AQ13946 482 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 MLF2Q15773 248 aaPredicted RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 HKDC1Q2TB90 917 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 CPTPQ5TA50 214 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 LPCAT2Q7L5N7 544 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 KRT78Q8N1N4 520 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 CNBD2Q96M20 576 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 CARS2Q9HA77 564 aaKnown RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 MYNNQ9NPC7 610 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 DCAF13Q9NV06 445 aaKnown RBP16.57■□□□□ 0.24
CCDC197-202ENST00000444118 TAC3Q9UHF0 121 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 PIAS3Q9Y6X2 628 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 LRP4O75096 1905 aa16.57■□□□□ 0.24
CCDC197-202ENST00000444118 SH3BGRLO75368 114 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 CREG1O75629 220 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 EPN2O95208 641 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 CHRNB3Q05901 458 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 ANXA8L1Q5VT79 327 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 DUS1LQ6P1R4 473 aaKnown RBP16.56■□□□□ 0.24
CCDC197-202ENST00000444118 Q7L0L9 218 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 CLECL1Q8IZS7 167 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 FAM86B1Q8N7N1 296 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 CDC26Q8NHZ8 85 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 SH3KBP1Q96B97 665 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 INSM2Q96T92 566 aaPredicted RBP16.56■□□□□ 0.24
CCDC197-202ENST00000444118 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
CCDC197-202ENST00000444118 APOOQ9BUR5 198 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 BDH2Q9BUT1 245 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 ANKRD60Q9BZ19 345 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 PITHD1Q9GZP4 211 aaPredicted RBP16.56■□□□□ 0.24
CCDC197-202ENST00000444118 OR51B5Q9H339 312 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 C8orf33Q9H7E9 229 aaPredicted RBP16.56■□□□□ 0.24
CCDC197-202ENST00000444118 PCDHGB4Q9UN71 923 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 PCDHGB5Q9Y5G0 923 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 V9GYQ6 96 aa16.56■□□□□ 0.24
CCDC197-202ENST00000444118 C1orf226A1L170 272 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 EVPLLA8MZ36 301 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 CLIC1O00299 241 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 RNASET2O00584 256 aaKnown RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 DEAF1O75398 565 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 SEMA3DO95025 777 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TGFB1P01137 390 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 HOXC4P09017 264 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 LINGO3P0C6S8 592 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 RPS6KA3P51812 740 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 PPP2CBP62714 309 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 PPP2CAP67775 309 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 NKG7Q16617 165 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 ANKRD26P1Q6NSI1 321 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 ST13P4Q8IZP2 240 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 PGBD3Q8N328 593 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 LINC01555Q8NAE3 123 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 DRAXINQ8NBI3 349 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 OR4K1Q8NGD4 311 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 DNASE1L2Q92874 299 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 SIPA1Q96FS4 1042 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 C12orf66Q96MD2 445 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 ACAT2Q9BWD1 397 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 BHLHE41Q9C0J9 482 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 REEP4Q9H6H4 257 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 MAGIXQ9H6Y5 334 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 ZNF696Q9H7X3 374 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 NTN4Q9HB63 628 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3DA0A087WVF3 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3IA0A087WXS9 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3EA0A087X179 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3KA0A087X1G2 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3FA6NER0 549 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3LB9A6J9 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 PDLIM1O00151 329 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 CACNB4O00305 520 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 UPK1AO00322 258 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 CLOCKO15516 846 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 KLHL18O94889 574 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBX6O95947 436 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3HP0C7X1 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 CXCR2P25025 360 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 PTX3P26022 381 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 SERPINB1P30740 379 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 RPL3P39023 403 aaKnown RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 REEP5Q00765 189 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 GRSF1Q12849 480 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 GK3PQ14409 553 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3GQ6DHY5 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3CQ6IPX1 549 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 ENPP6Q6UWR7 440 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TBC1D3Q8IZP1 549 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 C2orf73Q8N5S3 287 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-202ENST00000444118 DENND6BQ8NEG7 585 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 VPS37AQ8NEZ2 397 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 TFAP2CQ92754 450 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 FAM162AQ96A26 154 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 NRTNQ99748 197 aa16.55■□□□□ 0.24
CCDC197-202ENST00000444118 AIF1LQ9BQI0 150 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms