RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 APOLD1Q96LR9 279 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 RILPQ96NA2 401 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
SF1-210ENST00000443908 CD180Q99467 661 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 SPNS1Q9H2V7 528 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 RHBGQ9H310 441 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
SF1-210ENST00000443908 EVA1BQ9NVM1 165 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 IGSF10Q6WRI0 2623 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 LY6G6EA0A0G2JKS1 128 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 EME2A4GXA9 379 aaPredicted RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 H7BY64 318 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 CCDC22O60826 627 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 PDYNP01213 254 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 LINC00032P0C843 101 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 EZRP15311 586 aaKnown RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 PCSK2P16519 638 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 LBPP18428 481 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 GRIA3P42263 894 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 YBX1P67809 324 aaKnown RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■□□□ 11.4
SF1-210ENST00000443908 SQSTM1Q13501 440 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 PROX2Q3B8N5 592 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 SPDYAQ5MJ70 313 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 FAM91A1Q658Y4 838 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 Q6ZSR9 355 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 ZNF761Q86XN6 746 aaPredicted RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 TUBGCP3Q96CW5 907 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 PRAP1Q96NZ9 151 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 MYLK2Q9H1R3 596 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 AKTIPQ9H8T0 292 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 FARSBQ9NSD9 589 aaKnown RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 HEY2Q9UBP5 337 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 PTGDR2Q9Y5Y4 395 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 U3KQA8 63 aa12.88□□□□□ -0.35
SF1-210ENST00000443908 TDRD6O60522 2096 aaKnown RBP12.88□□□□□ -0.35
SF1-210ENST00000443908 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 LSM1O15116 133 aaKnown RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 DUX1O43812 170 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ACPPP15309 386 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 CKMT2P17540 419 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ADSLP30566 484 aaPredicted RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 AHRP35869 848 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 SCTRP47872 440 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 ACADVLP49748 655 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ATP4BP51164 291 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 RPS15AP62244 130 aaKnown RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 SPATA19Q7Z5L4 167 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 PARP9Q8IXQ6 854 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 HUS1BQ8NHY5 278 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 FGF11Q92914 225 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 PRR11Q96HE9 360 aaPredicted RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 PPP1R36Q96LQ0 422 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 LRRC37BQ96QE4 947 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ACPTQ9BZG2 426 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ABCG4Q9H172 646 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ZNF385DQ9H6B1 395 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 DMRT3Q9NQL9 472 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 C1GALT1Q9NS00 363 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 ASIC5Q9NY37 505 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 CELSR3Q9NYQ7 3312 aa12.87□□□□□ -0.35
SF1-210ENST00000443908 MN1Q10571 1320 aaPredicted RBP12.87□□□□□ -0.35
SF1-210ENST00000443908 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
SF1-210ENST00000443908 ATP6AP2A0A1C7CYW4 349 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 TLCD2A6NGC4 264 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 E9PBE3 544 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 SLC22A2O15244 555 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
SF1-210ENST00000443908 KLHL41O60662 606 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 CLEC3AO75596 197 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 ATP6AP2O75787 350 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 SEMA3DO95025 777 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 C9P02748 559 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 PCNAP12004 261 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 CKMT1AP12532 417 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 TYRP1P17643 537 aa12.86□□□□□ -0.35
SF1-210ENST00000443908 MAGP20916 626 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms