RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C1QTNF3Q9BXJ4 246 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CHST8Q9H2A9 424 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CENPHQ9H3R5 247 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 IPPKQ9H8X2 491 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 WDR70Q9NW82 654 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 COPG2Q9UBF2 871 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 CROTQ9UKG9 612 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 PADI1Q9ULC6 663 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 SRPK3Q9UPE1 567 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 PLLPQ9Y342 182 aa15.27■□□□□ 0.04
USP39-205ENST00000442708 ITPR1Q14643 2758 aa15.27■□□□□ 0.03
USP39-205ENST00000442708 DSCR3O14972 297 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 RRP8O43159 456 aaKnown RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 FOXS1O43638 330 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TYROBPO43914 113 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 H2AFYO75367 372 aaKnown RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 TBX6O95947 436 aaPredicted RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 HBQ1P09105 142 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TSPAN8P19075 237 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TAC1P20366 129 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 ALAS2P22557 587 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 AHRP35869 848 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 PRKAA2P54646 552 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 CDH13P55290 713 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 HERVK_113P63132 956 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 FAM198BQ6UWH4 519 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TMIGD1Q6UXZ0 262 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 PRSS41Q7RTY9 318 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 ASPGQ86U10 573 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 SHISA5Q8N114 240 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 IL22RA1Q8N6P7 574 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 OR52B6Q8NGF0 335 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 TCP10LQ8TDR4 215 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 SLC13A3Q8WWT9 602 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 MR1Q95460 341 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 ERVK-6Q9BXR3 956 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 SLC7A5P2Q9GIP4 190 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 NT5DC2Q9H857 520 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 NOL11Q9H8H0 719 aaKnown RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 IL17BQ9UHF5 180 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 ZFP69BQ9UJL9 534 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 ANGPTL3Q9Y5C1 460 aa15.26■□□□□ 0.03
USP39-205ENST00000442708 MRPS18BQ9Y676 258 aaKnown RBP15.26■□□□□ 0.03
USP39-205ENST00000442708 A0A1B0GX78 115 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 C4orf51C9J302 202 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 CNOT3O75175 753 aaKnown RBP15.25■□□□□ 0.03
USP39-205ENST00000442708 CCNYL3P0C7X3 344 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 MYL2P10916 166 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 CPA3P15088 417 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 TCN2P20062 427 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 IMPDH1P20839 514 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 OR1D4P47884 311 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 ATP1A2P50993 1020 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 ARSFP54793 590 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 EMP3P54852 163 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 FOXL2P58012 376 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 TRAF3Q13114 568 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 SLC9A5Q14940 896 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 PCLAFQ15004 111 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 FAM214AQ32MH5 1076 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 NKAIN1Q4KMZ8 207 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 FAM69BQ5VUD6 431 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
USP39-205ENST00000442708 TMEM214Q6NUQ4 689 aaKnown RBP15.25■□□□□ 0.03
USP39-205ENST00000442708 COX15Q7KZN9 410 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 KRT78Q8N1N4 520 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 ARMC2Q8NEN0 867 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 NT5CQ8TCD5 201 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 L3HYPDHQ96EM0 354 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 FAM111AQ96PZ2 611 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 CDK15Q96Q40 435 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 EFCAB11Q9BUY7 163 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 SEMA4BQ9NPR2 832 aaPredicted RBP15.25■□□□□ 0.03
USP39-205ENST00000442708 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 ZNF225Q9UK10 706 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 RNF11Q9Y3C5 154 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 MAU2Q9Y6X3 613 aa15.25■□□□□ 0.03
USP39-205ENST00000442708 PKD1L2Q7Z442 2459 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 NDUFS4O43181 175 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 KATNA1O75449 491 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 B3GALT4O96024 378 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 SERPIND1P05546 499 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 KLK3P07288 261 aaPredicted RBP15.24■□□□□ 0.03
USP39-205ENST00000442708 DLSTP36957 453 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 CCR10P46092 362 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 DCDP81605 110 aaKnown RBP15.24■□□□□ 0.03
USP39-205ENST00000442708 MPP2Q14168 576 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 MUM1Q2TAK8 710 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 MANEAQ5SRI9 462 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 GRHL2Q6ISB3 625 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 PDSS2Q86YH6 399 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 C10orf107Q8IVU9 208 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 RNF175Q8N4F7 328 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 TBC1D19Q8N5T2 526 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 L3MBTL4Q8NA19 623 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 CAMKVQ8NCB2 501 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 ZCCHC10Q8TBK6 192 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms