RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 GPR85P60893 370 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 RHAGQ02094 409 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
LINC00642-202ENST00000442515 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.05□□□□□ -0.32
LINC00642-202ENST00000442515 CHSY3Q70JA7 882 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 ZNF534Q76KX8 674 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 ADCK2Q7Z695 626 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 PCGF5Q86SE9 256 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 OR5M9Q8NGP3 310 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 MAGEC3Q8TD91 643 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 SMPDL3AQ92484 453 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 IQCDQ96DY2 449 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 FOPNLQ96NB1 174 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 TTYH2Q9BSA4 534 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
LINC00642-202ENST00000442515 LRRC40Q9H9A6 602 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 UTP6Q9NYH9 597 aaKnown RBP13.05□□□□□ -0.32
LINC00642-202ENST00000442515 Q9UFV3 132 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 CBLCQ9ULV8 474 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
LINC00642-202ENST00000442515 SGK494L7N484 410 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 GLI4P10075 376 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 ADH7P40394 386 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 BCL6P41182 706 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 OR4D2P58180 307 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 RELAQ04206 551 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 PRDX1Q06830 199 aaKnown RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 SLC25A35Q3KQZ1 300 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 GXYLT1Q4G148 440 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 ICE2Q659A1 982 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 B3GNT6Q6ZMB0 384 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 WDR53Q7Z5U6 358 aaPredicted RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 LDB1Q86U70 411 aaPredicted RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 RCOR2Q8IZ40 523 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 PLPP5Q8NEB5 264 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 MCOLN3Q8TDD5 553 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
LINC00642-202ENST00000442515 SCN2AQ99250 2005 aa13.04□□□□□ -0.32
LINC00642-202ENST00000442515 FIGNL2A6NMB9 653 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 PRMT5O14744 637 aaPredicted RBP13.03□□□□□ -0.32
LINC00642-202ENST00000442515 AKR1B10O60218 316 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 RDH16O75452 317 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 CCNDBP1O95273 360 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 METTL18O95568 372 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 CTNNA2P26232 953 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 FLYWCH1Q4VC44 716 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 PTRHD1Q6GMV3 140 aaKnown RBP13.03□□□□□ -0.32
LINC00642-202ENST00000442515 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 OTOAQ7RTW8 1153 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 VN1R4Q7Z5H5 301 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 OR9A1PQ8NGU1 263 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 OR4L1Q8NH43 312 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 KRT35Q92764 455 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 COX4I2Q96KJ9 171 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 PANX3Q96QZ0 392 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 MACROD1Q9BQ69 325 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 LANCL2Q9NS86 450 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
LINC00642-202ENST00000442515 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00642-202ENST00000442515 NBEAL1Q6ZS30 2694 aa13.02□□□□□ -0.32
LINC00642-202ENST00000442515 CUBNO60494 3623 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 MAGEB17A8MXT2 336 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 FCHO1O14526 889 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PJA2O43164 708 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 UQCRC1P31930 480 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PEX19P40855 299 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PARP6Q2NL67 630 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 FASTKD1Q53R41 847 aaKnown RBP13.02□□□□□ -0.33
LINC00642-202ENST00000442515 RTL6Q6ICC9 239 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
LINC00642-202ENST00000442515 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PAOXQ6QHF9 649 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 MDGA2Q7Z553 956 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 ZCCHC10Q8TBK6 192 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 CREB3L4Q8TEY5 395 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 SLCO2A1Q92959 643 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 PEX11GQ96HA9 241 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 ZNF778Q96MU6 729 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 SARGQ9BW04 601 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 ATG10Q9H0Y0 220 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 ANK2Q01484 3957 aa13.02□□□□□ -0.33
LINC00642-202ENST00000442515 FAM166BA8MTA8 275 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 MYO1CO00159 1063 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 PPARGP37231 505 aaPredicted RBP13.01□□□□□ -0.33
LINC00642-202ENST00000442515 DCAF7P61962 342 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 MPP1Q00013 466 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 ACVR1Q04771 509 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 PCBP2Q15366 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00642-202ENST00000442515 ANKRD20A4Q4UJ75 823 aa13.01□□□□□ -0.33
LINC00642-202ENST00000442515 AARS2Q5JTZ9 985 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms