RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 WDPCPO95876 746 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 CELA2AP08217 269 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 IL10P22301 178 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 COL8A1P27658 744 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 BCL6P41182 706 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 CCR8P51685 355 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 AP1S2P56377 157 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 TAS2R50P59544 299 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 ACTN3Q08043 901 aaPredicted RBP11.13□□□□□ -0.63
TTC28-203ENST00000442232 RGS1Q08116 209 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 NAA30Q147X3 362 aaPredicted RBP11.13□□□□□ -0.63
TTC28-203ENST00000442232 HERC3Q15034 1050 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 EXT1Q16394 746 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 DUPD1Q68J44 220 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 FAM45BPQ6NSW5 357 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
TTC28-203ENST00000442232 NIPAL1Q6NVV3 410 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 PAQR3Q6TCH7 311 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 LANCL3Q6ZV70 420 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 VN1R4Q7Z5H5 301 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 FJX1Q86VR8 437 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 SLC34A3Q8N130 599 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 PDIK1LQ8N165 341 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.63
TTC28-203ENST00000442232 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 FAM45AQ8TCE6 357 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 PSMF1Q92530 271 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 CFAP36Q96G28 342 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 CYTH2Q99418 400 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 SGPP1Q9BX95 441 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 KCNK13Q9HB14 408 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 STMN3Q9NZ72 180 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 NAALAD2Q9Y3Q0 740 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 CROCCQ5TZA2 2017 aa11.13□□□□□ -0.63
TTC28-203ENST00000442232 OR1F1O43749 312 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 SERPIND1P05546 499 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 STSP08842 583 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 ENO2P09104 434 aaPredicted RBP11.12□□□□□ -0.63
TTC28-203ENST00000442232 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
TTC28-203ENST00000442232 JAK1P23458 1154 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 CASP6P55212 293 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 CDKN2DP55273 166 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 KCNK10P57789 538 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 CSHL1Q14406 222 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 RBM20Q5T481 1227 aaKnown RBP11.12□□□□□ -0.63
TTC28-203ENST00000442232 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 PLAG1Q6DJT9 500 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 ABHD13Q7L211 337 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 PRSS41Q7RTY9 318 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 ANKRD37Q7Z713 158 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 GALNT7Q86SF2 657 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 SLC26A11Q86WA9 606 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 LURAP1LQ8IV03 231 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 CNTN4Q8IWV2 1026 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 IMMP1LQ96LU5 166 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 RUNDC3BQ96NL0 473 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 OR1F2PQ96R84 312 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 LPAR4Q99677 370 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 MACROD1Q9BQ69 325 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 RBCK1Q9BYM8 510 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 DDX47Q9H0S4 455 aaKnown RBP11.12□□□□□ -0.63
TTC28-203ENST00000442232 SEC14L3Q9UDX4 400 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 CHMP2BQ9UQN3 213 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 SLC22A7Q9Y694 548 aa11.12□□□□□ -0.63
TTC28-203ENST00000442232 IGHV3-20A0A0C4DH32 117 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 TRBC2A0A5B9 178 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 URADA6NGE7 173 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZNF860A6NHJ4 632 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 TTI1O43156 1089 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZG16O60844 167 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 BANF1O75531 89 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 UNC5CO95185 931 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 GUCA1CO95843 209 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 AHSGP02765 367 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 MORF4L2Q15014 288 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ABRAXAS2Q15018 415 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
TTC28-203ENST00000442232 NSDHLQ15738 373 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 PHKG1Q16816 387 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 MEP1AQ16819 746 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.11□□□□□ -0.63
TTC28-203ENST00000442232 SFT2D3Q587I9 215 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ACER2Q5QJU3 275 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 HECTD2Q5U5R9 776 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 PAPD4Q6PIY7 484 aaKnown RBP11.11□□□□□ -0.63
TTC28-203ENST00000442232 TMEM207Q6UWW9 146 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SYDE1Q6ZW31 735 aaPredicted RBP11.11□□□□□ -0.63
TTC28-203ENST00000442232 FRA10AC1Q70Z53 315 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SLC5A8Q8N695 610 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 HORMAD2Q8N7B1 307 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 KCT2Q8NC54 265 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 FAM98AQ8NCA5 519 aaKnown RBP11.11□□□□□ -0.63
TTC28-203ENST00000442232 M1APQ8TC57 530 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SLCO2A1Q92959 643 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms