RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 PDSS2Q86YH6 399 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZADH2Q8N4Q0 377 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 AFAP1L2Q8N4X5 818 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 PPP4R1Q8TF05 950 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 SLC5A11Q8WWX8 675 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 PSMF1Q92530 271 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 NEIL2Q969S2 332 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 SNRNP40Q96DI7 357 aaKnown RBP17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 PHACTR1Q9C0D0 580 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 VPS4AQ9UN37 437 aa17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
HMGB3P22-201ENST00000442010 POLEQ07864 2286 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 ICE1Q9Y2F5 2266 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 TRBC2A0A5B9 178 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 PABPN1LA6NDY0 278 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 FAM159BA6NKW6 160 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 JRKO75564 520 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 KLHL18O94889 574 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 HEXBP07686 556 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 POU4F1Q01851 419 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 ILF2Q12905 390 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 PCOLCEQ15113 449 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZDHHC24Q6UX98 284 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 THOC6Q86W42 341 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 ZNF740Q8NDX6 193 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 OR51Q1Q8NH59 317 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 FBXO25Q8TCJ0 367 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 MOCOSQ96EN8 888 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 C19orf60Q96EN9 201 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 BARD1Q99728 777 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 WDR77Q9BQA1 342 aaPredicted RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 GPAMQ9HCL2 828 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 OARD1Q9Y530 152 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 PCDHGA10Q9Y5H3 936 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 SLC22A7Q9Y694 548 aa17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 USP9YO00507 2555 aaPredicted RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 SPTBN1Q01082 2364 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 SPTAN1Q13813 2472 aaKnown RBP17.9■□□□□ 0.46
HMGB3P22-201ENST00000442010 NSG1A0A0A6YYJ2 146 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 TCP11X1B4DZS4 312 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 SGK494L7N484 410 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 CYC1P08574 325 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 GSTA2P09210 222 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 PRR35P0CG20 571 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 CXCR2P25025 360 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 VARSP26640 1264 aaKnown RBP17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 SCTRP47872 440 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 PLTPP55058 493 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 EEF1A2Q05639 463 aaKnown RBP17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 PWP1Q13610 501 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 TSNQ15631 228 aaKnown RBP17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 FAAH2Q6GMR7 532 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 C3orf62Q6ZUJ4 267 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 KBTBD2Q8IY47 623 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 KLHDC8AQ8IYD2 350 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 IQCKQ8N0W5 287 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 FAM26EQ8N5C1 309 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 AMER2Q8N7J2 671 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 ZCCHC10Q8TBK6 192 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 LMF1Q96S06 567 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 GPR22Q99680 433 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 RBBP8Q99708 897 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 CPNE1Q99829 537 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 VN1R1Q9GZP7 353 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 ZNF700Q9H0M5 742 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 ANKHQ9HCJ1 492 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 MKL2Q9ULH7 1088 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 SLC22A14Q9Y267 594 aa17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 UTP11Q9Y3A2 253 aaKnown RBP17.89■□□□□ 0.45
HMGB3P22-201ENST00000442010 CTAGE15A4D2H0 777 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 OR1F1O43749 312 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 SLC35G6P0C7Q6 338 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 SOX11P35716 441 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 XCR1P46094 333 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 SLC6A12P48065 614 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 REEP5Q00765 189 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CAV1Q03135 178 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 MFAP5Q13361 173 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CSHL1Q14406 222 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 IRAK1BP1Q5VVH5 260 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 ISLR2Q6UXK2 745 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 ADAMTSL2Q86TH1 951 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CTAGE6Q86UF2 777 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CISD2Q8N5K1 135 aaKnown RBP17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 NT5CQ8TCD5 201 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CDKL2Q92772 493 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 RHBDF1Q96CC6 855 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 IMMP1LQ96LU5 166 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 TSNARE1Q96NA8 513 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 ILKAPQ9H0C8 392 aaPredicted RBP17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 RAB17Q9H0T7 212 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CAB39LQ9H9S4 337 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 PELI2Q9HAT8 420 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 RIC8BQ9NVN3 520 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 ASF1BQ9NVP2 202 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 HCN3Q9P1Z3 774 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 CTNNAL1Q9UBT7 734 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 ZFP69BQ9UJL9 534 aa17.88■□□□□ 0.45
HMGB3P22-201ENST00000442010 NAALAD2Q9Y3Q0 740 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms