RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MOCOSQ96EN8 888 aa18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 ROPN1BQ9BZX4 212 aaPredicted RBP18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 ACTL8Q9H568 366 aa18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 ROPN1Q9HAT0 212 aaPredicted RBP18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 GPN3Q9UHW5 284 aaPredicted RBP18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 TMCO1Q9UM00 188 aa18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 ANGPTL3Q9Y5C1 460 aa18.54■□□□□ 0.56
SEMA3B-206ENST00000439487 GSTA1P08263 222 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 PRKAR1AP10644 381 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 CXCR2P25025 360 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 EEF1DP29692 281 aaKnown RBP18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 AHRP35869 848 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 IRF8Q02556 426 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 CHIT1Q13231 466 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 NCF4Q15080 339 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 ATP1A1-AS1Q5TC04 95 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 FAM69BQ5VUD6 431 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 COX15Q7KZN9 410 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 LCA5Q86VQ0 697 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 RIBC1Q8N443 379 aaPredicted RBP18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 KCT2Q8NC54 265 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 ZCCHC10Q8TBK6 192 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 SNRNP27Q8WVK2 155 aaKnown RBP18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 ZNF304Q9HCX3 659 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 DCDC2Q9UHG0 476 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 ZFP69BQ9UJL9 534 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 LHX6Q9UPM6 363 aa18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 TNPO3Q9Y5L0 923 aaKnown RBP18.53■□□□□ 0.56
SEMA3B-206ENST00000439487 NDUFS4O43181 175 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 FOXS1O43638 330 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 CREG1O75629 220 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 ONECUT2O95948 504 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 SLC35G6P0C7Q6 338 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 EPB42P16452 691 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 CD22P20273 847 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 FOXL2P58012 376 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 GTF2H2Q13888 395 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 ERV3-1Q14264 604 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 NDUFA9Q16795 377 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 GTF2H2CQ6P1K8 395 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 TMIGD1Q6UXZ0 262 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 GOLGA7Q7Z5G4 137 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 C4orf33Q8N1A6 199 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 KRT78Q8N1N4 520 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 COL26A1Q96A83 441 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 WDR34Q96EX3 536 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 PTCD3Q96EY7 689 aaKnown RBP18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 C17orf62Q9BQA9 187 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 EHD1Q9H4M9 534 aa18.52■□□□□ 0.56
SEMA3B-206ENST00000439487 A0A0A6YYC8 382 aaPredicted RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 A8MT66 165 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 STX16-NPEPL1H3BU86 382 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 I3L1I5 382 aaPredicted RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 STX16O14662 325 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 CNOT3O75175 753 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 GLRA3O75311 464 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 PIM1P11309 404 aaPredicted RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 MC1RQ01726 317 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 TMEM214Q6NUQ4 689 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 MRPL14Q6P1L8 145 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 PRMT9Q6P2P2 845 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 OVCH1Q7RTY7 1134 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 PRSS41Q7RTY9 318 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 TMEM151BQ8IW70 566 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.51■□□□□ 0.552e-13■□□□□ 9.6
SEMA3B-206ENST00000439487 NT5CQ8TCD5 201 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 MMABQ96EY8 250 aaPredicted RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 EFCAB11Q9BUY7 163 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 TMEM109Q9BVC6 243 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 DRC3Q9H069 523 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 NT5DC2Q9H857 520 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 LGALS13Q9UHV8 139 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 TCFL5Q9UL49 500 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 EMCNQ9ULC0 261 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 ZNF490Q9ULM2 529 aaPredicted RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 CDC14AQ9UNH5 594 aa18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 FASNP49327 2511 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-206ENST00000439487 CDC14CA4D256 554 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 E2F3O00716 465 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 FFAR3O14843 346 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 GPR42O15529 346 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 WFS1O76024 890 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 FURINP09958 794 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 IL1RNP18510 177 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 KRT4P19013 534 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 TAC1P20366 129 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 FBLP22087 321 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 CASP2P42575 452 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 SLC18A2Q05940 514 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 CDC20Q12834 499 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 LAPTM5Q13571 262 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 PWP1Q13610 501 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 FAM53BQ14153 422 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 TBCCQ15814 346 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 SYVN1Q86TM6 617 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 TRABD2AQ86V40 505 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 TRPV3Q8NET8 790 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 OR9A4Q8NGU2 314 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 CREB3L4Q8TEY5 395 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 MVB12AQ96EY5 273 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms