RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 CSNK1A1LQ8N752 337 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CDYL2Q8N8U2 506 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 TTC29Q8NA56 475 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 ZNF75CPQ92670 426 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 ZNF501Q96CX3 271 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 ZNF285Q96NJ3 590 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 FRG2BQ96QU4 278 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CCT7Q99832 543 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 DDA1Q9BW61 102 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 POLR1BQ9H9Y6 1135 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 NMRK1Q9NWW6 199 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SRPK3Q9UPE1 567 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 RAP2CQ9Y3L5 183 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 ADAMTS20P59510 1910 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 FOXE1O00358 373 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 PPP6CO00743 305 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 NDUFS4O43181 175 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 EIF2S1P05198 315 aaKnown RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 SERPINA6P08185 405 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 HSD3B1P14060 373 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 HSD3B2P26439 372 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 HK2P52789 917 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CLDN6P56747 220 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SKP1P63208 163 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 TGM3Q08188 693 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 FOXC1Q12948 553 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 DEFB110Q30KQ9 67 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 C3orf38Q5JPI3 329 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 WASHC2DQ5SRD0 308 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 RGS9BPQ6ZS82 235 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 BMPERQ8N8U9 685 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 GBP7Q8N8V2 638 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 ZNF740Q8NDX6 193 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 SELENOMQ8WWX9 145 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CCT6BQ92526 530 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 MOCOSQ96EN8 888 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 FAR2Q96K12 515 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 NRSN2Q9GZP1 204 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 ACSS2Q9NR19 701 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 PISDQ9UG56 409 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 ZNF490Q9ULM2 529 aaPredicted RBP12.88□□□□□ -0.35
EXT1-203ENST00000437196 PPT2Q9UMR5 302 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SATB2Q9UPW6 733 aa12.88□□□□□ -0.35
EXT1-203ENST00000437196 SPTBP11277 2137 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 A0A088AWK7 358 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 FITM1A5D6W6 292 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 SLCO1B7G3V0H7 640 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 UBFD1O14562 309 aaKnown RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 SERPIND1P05546 499 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 CHRNGP07510 517 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 CCL4P13236 92 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 ZNF10P21506 573 aaPredicted RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 PTX3P26022 381 aaPredicted RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
EXT1-203ENST00000437196 MAPK10P53779 464 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 TMEM35AQ53FP2 167 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 FRMPD2BQ6IN97 320 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 FOXR1Q6PIV2 292 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 IGF2-ASQ6U949 168 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 TMEM126BQ8IUX1 230 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.87□□□□□ -0.35
EXT1-203ENST00000437196 ANKRD53Q8N9V6 530 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 HUS1BQ8NHY5 278 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 WDR20Q8TBZ3 569 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 NT5CQ8TCD5 201 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 TM4SF19Q96DZ7 209 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 SPNS1Q9H2V7 528 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 BRF2Q9HAW0 419 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 HAO1Q9UJM8 370 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 PCDHB3Q9Y5E6 796 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 SEC16AO15027 2179 aa12.87□□□□□ -0.35
EXT1-203ENST00000437196 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 LOC102723532A0A0G2JNH3 316 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 SERTM1A2A2V5 107 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 FAM149AA5PLN7 773 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 MANBAO00462 879 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 FFAR3O14843 346 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 GPR42O15529 346 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
EXT1-203ENST00000437196 NRP2O60462 931 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms