RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 EHD1Q9H4M9 534 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 WDR55Q9H6Y2 383 aaPredicted RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC6A20Q9NP91 592 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 FARSBQ9NSD9 589 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 GEMIN8Q9NWZ8 242 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 KCNK4Q9NYG8 393 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 LRIT1Q9P2V4 623 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 RAB23Q9ULC3 237 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF490Q9ULM2 529 aaPredicted RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 BTRCQ9Y297 605 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PTGDR2Q9Y5Y4 395 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 U3KQA8 63 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TRIOO75962 3097 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 EML5Q05BV3 1969 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 A0A0G2JND7 137 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GOLGA8QA0A0J9YX86 632 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 LNP1A1A4G5 178 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PIPSLA2A3N6 862 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ANKRD34BA5PLL1 514 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GOLGA8OA6NCC3 632 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 OR5K3A6NET4 321 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 LILRA5A6NI73 299 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 RHPN2P1A8MT19 583 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ISM1B1AKI9 464 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GOLGA8NF8WBI6 632 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 H0YIV9 168 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 H7BY64 318 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SDHDO14521 159 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 FFAR3O14843 346 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PIP5K1BO14986 540 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GPR42O15529 346 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 B4GAT1O43505 415 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SIGLEC6O43699 453 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 NUDT21O43809 227 aaKnown RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 DIAPH2O60879 1101 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SKAP2O75563 359 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CRCPO75575 148 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 UBXN7O94888 489 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CER1O95813 267 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF806P0C7X5 589 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 LINC00032P0C843 101 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GLB1P16278 677 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 UGT2B7P16662 529 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 TYRP1P17643 537 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 POLR2CP19387 275 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 HNF4AP41235 474 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 LSSP48449 732 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ARFIP2P53365 341 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 INHBCP55103 352 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PPP1CAP62136 330 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CSNK1G2P78368 415 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ABATP80404 500 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 MEF2AQ02078 507 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SLBPQ14493 270 aaKnown RBP eCLIP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 KIR2DS3Q14952 304 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ABRAXAS2Q15018 415 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SF3A2Q15428 464 aaKnown RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PDCD2Q16342 344 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SGO1Q5FBB7 561 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GKAP1Q5VSY0 366 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 KIAA1614Q5VZ46 1190 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ADNP2Q6IQ32 1131 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 GRHL2Q6ISB3 625 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ZCCHC8Q6NZY4 707 aaKnown RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SCIMPQ6UWF3 145 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 DBX2Q6ZNG2 339 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 TMPRSS11BQ86T26 416 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 MYLK4Q86YV6 388 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 KIRREL3Q8IZU9 778 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 CHCHD4Q8N4Q1 142 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 MINDY1Q8N5J2 469 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 EID2Q8N6I1 236 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 FAM181AQ8N9Y4 354 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF740Q8NDX6 193 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 OR2T11Q8NH01 316 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 WDR20Q8TBZ3 569 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 TWIST2Q8WVJ9 160 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 RSC1A1Q92681 617 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 USP7Q93009 1102 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 MAELQ96JY0 434 aaKnown RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PPP1R36Q96LQ0 422 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 APOLD1Q96LR9 279 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PPM1MQ96MI6 270 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PRAP1Q96NZ9 151 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 OR52B2Q96RD2 323 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC38A3Q99624 504 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PRRX2Q99811 253 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SIKE1Q9BRV8 207 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 DUSP23Q9BVJ7 150 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC29A3Q9BZD2 475 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 MEAF6Q9HAF1 191 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 HRASLS2Q9NWW9 162 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 PADI4Q9UM07 663 aa6.75□□□□□ -1.33
LSM3P3-201ENST00000436601 KLHL20Q9Y2M5 609 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms