RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SLC13A3Q8WWT9 602 aa17.48■□□□□ 0.39
HLA-F-220ENST00000434407 UBL7Q96S82 380 aaPredicted RBP17.48■□□□□ 0.39
HLA-F-220ENST00000434407 PARD6BQ9BYG5 372 aa17.48■□□□□ 0.39
HLA-F-220ENST00000434407 PITHD1Q9GZP4 211 aaPredicted RBP17.48■□□□□ 0.39
HLA-F-220ENST00000434407 NT5DC2Q9H857 520 aa17.48■□□□□ 0.39
HLA-F-220ENST00000434407 GEMIN8Q9NWZ8 242 aaKnown RBP17.48■□□□□ 0.39
HLA-F-220ENST00000434407 ZFP69BQ9UJL9 534 aa17.48■□□□□ 0.39
HLA-F-220ENST00000434407 BSNQ9UPA5 3926 aa17.48■□□□□ 0.39
HLA-F-220ENST00000434407 IGLV3-12A0A075B6K2 115 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 OR1F1O43749 312 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 NUDT17P0C025 328 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 PRKAR1AP10644 381 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 VARSP26640 1264 aaKnown RBP17.47■□□□□ 0.39
HLA-F-220ENST00000434407 OR1D4P47884 311 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 PWP1Q13610 501 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 PCBP2Q15366 365 aaKnown RBP eCLIP17.47■□□□□ 0.39
HLA-F-220ENST00000434407 TBCCQ15814 346 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 TBR1Q16650 682 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 PDK4Q16654 411 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 NDUFA9Q16795 377 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 LINC00303Q3SY05 128 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 MLIPQ5VWP3 458 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 SH2D5Q6ZV89 423 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 TBC1D19Q8N5T2 526 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 OR2Y1Q8NGV0 311 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 NT5CQ8TCD5 201 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 MRPL57Q9BQC6 102 aaKnown RBP17.47■□□□□ 0.39
HLA-F-220ENST00000434407 DRC3Q9H069 523 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 WDR54Q9H977 334 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 ZNF304Q9HCX3 659 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 GPN3Q9UHW5 284 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-220ENST00000434407 CDC14AQ9UNH5 594 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 PADI2Q9Y2J8 665 aa17.47■□□□□ 0.39
HLA-F-220ENST00000434407 MRPS2Q9Y399 296 aaKnown RBP17.47■□□□□ 0.39
HLA-F-220ENST00000434407 NUP210LQ5VU65 1888 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 VSTM2BA6NLU5 285 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 K7EPI3 171 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 CCNT2O60583 730 aaKnown RBP17.46■□□□□ 0.39
HLA-F-220ENST00000434407 SBK3P0C264 359 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 CXCR2P25025 360 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 DSG2Q14126 1118 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.39
HLA-F-220ENST00000434407 SLC9A5Q14940 896 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 NKG7Q16617 165 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 PFKFB4Q16877 469 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 FAM69BQ5VUD6 431 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 C16orf46Q6P387 395 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 AFAP1L2Q8N4X5 818 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 MREGQ8N565 214 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 AMER3Q8N944 861 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 LSM14AQ8ND56 463 aaKnown RBP17.46■□□□□ 0.39
HLA-F-220ENST00000434407 SEC16BQ96JE7 1060 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 MACROD1Q9BQ69 325 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 MRPL46Q9H2W6 279 aaKnown RBP17.46■□□□□ 0.39
HLA-F-220ENST00000434407 TMCO1Q9UM00 188 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 SLC22A7Q9Y694 548 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 MAU2Q9Y6X3 613 aa17.46■□□□□ 0.39
HLA-F-220ENST00000434407 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 CLGNO14967 610 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 H2AFYO75367 372 aaKnown RBP17.45■□□□□ 0.38
HLA-F-220ENST00000434407 WFS1O76024 890 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 NSA2O95478 260 aaKnown RBP17.45■□□□□ 0.38
HLA-F-220ENST00000434407 STATHP02808 62 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 SLC35G6P0C7Q6 338 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 GFAPP14136 432 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 CD22P20273 847 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 SSPNQ14714 243 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 METTL27Q8N6F8 245 aaPredicted RBP17.45■□□□□ 0.38
HLA-F-220ENST00000434407 SNX31Q8N9S9 440 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 KCT2Q8NC54 265 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 TRPV3Q8NET8 790 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 CREB3L4Q8TEY5 395 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 THAP4Q8WY91 577 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 EXTL1Q92935 676 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 MOCOSQ96EN8 888 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 PTCD3Q96EY7 689 aaKnown RBP17.45■□□□□ 0.38
HLA-F-220ENST00000434407 SPSB2Q99619 263 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 XPR1Q9UBH6 696 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 OPTCQ9UBM4 332 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 CTSFQ9UBX1 484 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 TBK1Q9UHD2 729 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 POLHQ9Y253 713 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 TNPO3Q9Y5L0 923 aaKnown RBP17.45■□□□□ 0.38
HLA-F-220ENST00000434407 PCSK5Q92824 1860 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 SCN2AQ99250 2005 aa17.45■□□□□ 0.38
HLA-F-220ENST00000434407 CDC14CA4D256 554 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 H0YIG0 161 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 STX16-NPEPL1H3BU86 382 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 TK2O00142 265 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 STX16O14662 325 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 ATXN7O15265 892 aaPredicted RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 PRPF4O43172 522 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 CDH16O75309 829 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 TUBBP07437 444 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 UMODP07911 640 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 SERPINA6P08185 405 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 GSTA1P08263 222 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 GSTM2P28161 218 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 HYAL2Q12891 473 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms