RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 PPCSQ9HAB8 311 aa16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 ZNF282Q9UDV7 671 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 ZFP69BQ9UJL9 534 aa16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 TUBD1Q9UJT1 453 aa16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 KCNMB2Q9Y691 235 aa16.53■□□□□ 0.24
CTDSP1-203ENST00000431127 HELZ2Q9BYK8 2649 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 H0YIG0 161 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 UBXN8O00124 270 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 MAP2K7O14733 419 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 CCNT2O60583 730 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 FAM87AP0C7U9 286 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 GFAPP14136 432 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 GSTM2P28161 218 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 GCAP28676 217 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 POLE2P56282 527 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 RGS1Q08116 209 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 FAM69BQ5VUD6 431 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 APLFQ8IW19 511 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 KRT78Q8N1N4 520 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 ZNF740Q8NDX6 193 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 TTLQ8NG68 377 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 UBLCP1Q8WVY7 318 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 SEC16BQ96JE7 1060 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 EPB41L4BQ9H329 900 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 PSMC3IPQ9P2W1 217 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 CTSFQ9UBX1 484 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 SLC22A7Q9Y694 548 aa16.52■□□□□ 0.24
CTDSP1-203ENST00000431127 MDC1Q14676 2089 aaKnown RBP16.52■□□□□ 0.23
CTDSP1-203ENST00000431127 ATMQ13315 3056 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 FER1L5A0AVI2 2057 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 IGLV3-12A0A075B6K2 115 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 A0A0A6YYC8 382 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 URADA6NGE7 173 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 VSTM2BA6NLU5 285 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 I3L1I5 382 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 NDUFS4O43181 175 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 FOXS1O43638 330 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 CNOT3O75175 753 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 NSA2O95478 260 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 IGHEP01854 428 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 STATHP02808 62 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 MTHFD2P13995 350 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 OTX2P32243 289 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 RRADP55042 308 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 SKP1P63208 163 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 LY6DQ14210 128 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 HERC3Q15034 1050 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 RBBP5Q15291 538 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 FBXO48Q5FWF7 155 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 NIPAL1Q6NVV3 410 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 LCA5Q86VQ0 697 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 DTWD1Q8N5C7 304 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 EXD3Q8N9H8 876 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 NT5CQ8TCD5 201 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 ESAMQ96AP7 390 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 MIEF2Q96C03 454 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 NT5DC2Q9H857 520 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 ANKHQ9HCJ1 492 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 MKKSQ9NPJ1 570 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 OPTCQ9UBM4 332 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 TRPC4Q9UBN4 977 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 TMCO1Q9UM00 188 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 MAP4K5Q9Y4K4 846 aa16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 TNPO3Q9Y5L0 923 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-203ENST00000431127 K7EPI3 171 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 PEX12O00623 359 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 KLK8O60259 260 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SERPIND1P05546 499 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 ZGLP1P0C6A0 271 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 VARSP26640 1264 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 KCNAB2Q13303 367 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 LAPTM5Q13571 262 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SLBPQ14493 270 aaKnown RBP eCLIP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SETDB1Q15047 1291 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 PFKFB4Q16877 469 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 XKR6Q5GH73 641 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 TECRLQ5HYJ1 363 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 PAGE2BQ5JRK9 111 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 TMIGD1Q6UXZ0 262 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 MED25Q71SY5 747 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 PLD6Q8N2A8 252 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 AMER3Q8N944 861 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 TMEM102Q8N9M5 508 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 KCT2Q8NC54 265 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 STT3BQ8TCJ2 826 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 WDR34Q96EX3 536 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 PTCD3Q96EY7 689 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 VPS50Q96JG6 964 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SCYL1Q96KG9 808 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 SPSB2Q99619 263 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 MACROD1Q9BQ69 325 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 MRPL57Q9BQC6 102 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 EFCAB11Q9BUY7 163 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 YIPF2Q9BWQ6 316 aa16.5■□□□□ 0.23
CTDSP1-203ENST00000431127 TGIF2Q9GZN2 237 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms