RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 HERC3Q15034 1050 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 OR4D1Q15615 310 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 TUBB8Q3ZCM7 444 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 VWA5B1Q5TIE3 1220 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NIPAL1Q6NVV3 410 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 CMC1Q7Z7K0 106 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 PRSS58Q8IYP2 241 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 GALNT16Q8N428 558 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 KCT2Q8NC54 265 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 PDPRQ8NCN5 879 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 TRPV3Q8NET8 790 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 OR9A4Q8NGU2 314 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NT5CQ8TCD5 201 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 MACROD1Q9BQ69 325 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 FUT8Q9BYC5 575 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 EPN3Q9H201 632 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 CDC42EP4Q9H3Q1 356 aaKnown RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 ACSS3Q9H6R3 686 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NMRAL1Q9HBL8 299 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 ANKHQ9HCJ1 492 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 WWOXQ9NZC7 414 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 GPRC5BQ9NZH0 403 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 RNF112Q9ULX5 631 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 MRPS2Q9Y399 296 aaKnown RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 HEATR5BQ9P2D3 2071 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 SPTA1P02549 2419 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 A0A087X1B8 175 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 CCDC189A1A4V9 331 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 URADA6NGE7 173 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 MAP2K7O14733 419 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 FFAR3O14843 346 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 GPR42O15529 346 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 TAPBPO15533 448 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 H2AFYO75367 372 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 STK16O75716 305 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 BMP10O95393 424 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 HPP00738 406 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 S100BP04271 92 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 HEXBP07686 556 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 CYC1P08574 325 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 C1GALT1C1LP0DN25 315 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ACPPP15309 386 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 TFEBP19484 476 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 IL10P22301 178 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ITGA3P26006 1051 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 GSTM2P28161 218 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ECHS1P30084 290 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 GDF5P43026 501 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 SNRPNP63162 240 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 SKP1P63208 163 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 MAT1AQ00266 395 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 CDC16Q13042 620 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 UAP1Q16222 522 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 SYT16Q17RD7 645 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 C18orf21Q32NC0 220 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 MROH9Q5TGP6 573 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ATG9BQ674R7 924 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 SLCO4C1Q6ZQN7 724 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ABHD13Q7L211 337 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 PRSS41Q7RTY9 318 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ISCA2Q86U28 154 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ZC3H7AQ8IWR0 971 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ZNF740Q8NDX6 193 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 TTLQ8NG68 377 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 OR11G2Q8NGC1 345 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 OR51Q1Q8NH59 317 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ZCCHC10Q8TBK6 192 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 TM9SF4Q92544 642 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 TMEM79Q9BSE2 394 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 PITHD1Q9GZP4 211 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 SPNS1Q9H2V7 528 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 EHD1Q9H4M9 534 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ALG9Q9H6U8 611 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ZNF552Q9H707 407 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 DNAJC11Q9NVH1 559 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 NUDT4Q9NZJ9 180 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 CD274Q9NZQ7 290 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 PTBP2Q9UKA9 531 aaKnown RBP9.3□□□□□ -0.92
HDAC6-207ENST00000430858 ACOT9Q9Y305 439 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 PIEZO2Q9H5I5 2752 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
HDAC6-207ENST00000430858 FASNP49327 2511 aaKnown RBP9.29□□□□□ -0.92
HDAC6-207ENST00000430858 LOC102723996A0A087X1L8 192 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 NSG1A0A0A6YYJ2 146 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 A0A1W2PQ72 361 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 HMX2A2RU54 273 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 SYCE1LA8MT33 242 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 SGK494L7N484 410 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 MASP2O00187 686 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 CLGNO14967 610 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 KERAO60938 352 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 KLHL18O94889 574 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 WISP1O95388 367 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 ACSL3O95573 720 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 SERPIND1P05546 499 aa9.29□□□□□ -0.92
HDAC6-207ENST00000430858 C2P06681 752 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms