RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 KCNJ2P63252 427 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SLC25A3Q00325 362 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ADAMTSL4Q6UY14 1074 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 DHDDSQ86SQ9 333 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 NAT6Q93015 286 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 DNAAF2Q9NVR5 837 aaKnown RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 TMX2-CTNND1H3BSU7 103 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CASRP41180 1078 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 RAB8AP61006 207 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 PRR5P85299 388 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SYT13Q7L8C5 426 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 TRNT1Q96Q11 434 aaKnown RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 TOR1BO14657 336 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RPS15AP62244 130 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 SMAD2Q15796 467 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 FAM98AQ8NCA5 519 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 INTS6Q9UL03 887 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RNF11Q9Y3C5 154 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ASNA1O43681 348 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ERN1O75460 977 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 C1GALT1C1LP0DN25 315 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 TFPIP10646 304 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ME2P23368 584 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 IVDP26440 423 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 AK4P27144 223 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RFX4Q33E94 735 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RHEBL1Q8TAI7 183 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ERVK-11Q9UQG0 969 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 KLK1P06870 262 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 CHRNGP07510 517 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 HEXBP07686 556 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 PDHA2P29803 388 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 CEP97Q8IW35 865 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 TRPV4Q9HBA0 871 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 TAAR2Q9P1P5 351 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 WFS1O76024 890 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 IL12BP29460 328 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 NCBP2P52298 156 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 PSME3P61289 254 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 MEF2AQ02078 507 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 SLC18A2Q05940 514 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ZCCHC7Q8N3Z6 543 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF563Q8TA94 476 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 AGAP11Q8TF27 550 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 IER2Q9BTL4 223 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 TREX1Q9NSU2 369 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RPS6KA6Q9UK32 745 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 HTRA2O43464 458 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 DFNA5O60443 496 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 TNFRSF21O75509 655 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 MPIP34949 423 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 MASP1P48740 699 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 PSMD4P55036 377 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 OFCC1Q8IZS5 231 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 C1orf52Q8N6N3 182 aaKnown RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ZBED6CLQ96FA7 236 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 RMND5BQ96G75 393 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-207ENST00000429896 ART5Q96L15 291 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 DPH7Q9BTV6 452 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 SPAG4Q9NPE6 437 aa12.48□□□□□ -0.41
PTCH1-207ENST00000429896 OR2B3O76000 313 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 TOP3BO95985 862 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 AQP1P29972 269 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 IFNGR2P38484 337 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 VWA5B1Q5TIE3 1220 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 LIPJQ5W064 366 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 OLFML2AQ68BL7 652 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 PGBD2Q6P3X8 592 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 MYEOVQ96EZ4 313 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 LYARQ9NX58 379 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 HCN3Q9P1Z3 774 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 PTGFRNQ9P2B2 879 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 A8MUA0 341 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 VNN2O95498 520 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF678Q5SXM1 525 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 ZDHHC13Q8IUH4 622 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 RNPEPL1Q9HAU8 725 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 C4BPBP20851 252 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CTSCP53634 463 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 ITGADQ13349 1161 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 HKDC1Q2TB90 917 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 IL22RA1Q8N6P7 574 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms