RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SERPINA1P01009 418 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 LINGO3P0C6S8 592 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 RFX4Q33E94 735 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 NADSYN1Q6IA69 706 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 CEACAM20Q6UY09 585 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 OR4C6Q8NH72 309 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 EBF4Q9BQW3 602 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 ZDHHC2Q9UIJ5 367 aa16.51■□□□□ 0.23
SMARCA4-203ENST00000429416 OPN1SWP03999 348 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 AFF3P51826 1226 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ADRM1Q16186 407 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 BTN2A1Q7KYR7 527 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ATCAYQ86WG3 371 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 GATSQ8NAP1 163 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 DTD2Q96FN9 168 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 RANBP9Q96S59 729 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 IFT27Q9BW83 186 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ARHGEF9O43307 516 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 SCELO95171 688 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ST13P50502 369 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 OLR1P78380 273 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 GANABQ14697 944 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ACVR1CQ8NER5 493 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 CLPTM1LQ96KA5 538 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 POPDC3Q9HBV1 291 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 RASSF1Q9NS23 344 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 TMED5Q9Y3A6 229 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 SHOX2O60902 331 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 KRT36O76013 467 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 FNTBP49356 437 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ZNF763Q0D2J5 394 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 TCEAL1Q15170 157 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 Q7L0L9 218 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 RNF168Q8IYW5 571 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 LINC01465Q8N7H1 131 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 PNPLA1Q8N8W4 532 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 RBM15BQ8NDT2 890 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ELSPBP1Q96BH3 223 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 NOX1Q9Y5S8 564 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 PRSS38A1L453 326 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 TMED10P49755 219 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ARF5P84085 180 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 CTBSQ01459 385 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 HERC3Q15034 1050 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 FAM156AQ8NDB6 213 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 THUMPD1Q9NXG2 353 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 OARD1Q9Y530 152 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 PNMA8CA0A1B0GUJ8 204 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 STX16-NPEPL1H3BU86 382 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 STX16O14662 325 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 OR5F1O95221 314 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 HBQ1P09105 142 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 TCTE1Q5JU00 501 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 HIPK1Q86Z02 1210 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 OR56A1Q8NGH5 318 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 MSANTD3Q96H12 275 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 ZSWIM3Q96MP5 696 aa16.5■□□□□ 0.23
SMARCA4-203ENST00000429416 EFCAB10A6NFE3 127 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 RTCAO00442 366 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 SCO2O43819 266 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 C6orf47O95873 294 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 G6PDP11413 515 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 GSTM4Q03013 218 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 ZNF483Q8TF39 744 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 MYRFLQ96LU7 910 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 CAMK1GQ96NX5 476 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 OR51V1Q9H2C8 321 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 MED31Q9Y3C7 131 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 GADD45GO95257 159 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 KCNK13Q9HB14 408 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 RDH14Q9HBH5 336 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 PDP2Q9P2J9 529 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 PRODH2Q9UF12 536 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 MRPS7Q9Y2R9 242 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 ADAMDEC1O15204 470 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 SNX4O95219 450 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 LRP8Q14114 963 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 FAM69BQ5VUD6 431 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 OR4N5Q8IXE1 308 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 PGAM4Q8N0Y7 254 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 UXS1Q8NBZ7 420 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 LINC01599Q8WXQ3 324 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 MYDGFQ969H8 173 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 TRNT1Q96Q11 434 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 LPAR4Q99677 370 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 IL17CQ9P0M4 197 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 AGPSO00116 658 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 KLKB1P03952 638 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 CD68P34810 354 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 CDKN2DP55273 166 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 UNC5DQ6UXZ4 953 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 RNF111Q6ZNA4 994 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 C19orf18Q8NEA5 215 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 GIMAP2Q9UG22 337 aa16.49■□□□□ 0.23
SMARCA4-203ENST00000429416 A0A1B0GTW7 788 aa16.48■□□□□ 0.23
SMARCA4-203ENST00000429416 FAM149AA5PLN7 773 aa16.48■□□□□ 0.23
SMARCA4-203ENST00000429416 LIPJQ5W064 366 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms