RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IL6P05231 212 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 PRKACGP22612 351 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 STOMP27105 288 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 GGT5P36269 586 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 EPHB3P54753 998 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 TXNDC11Q6PKC3 985 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 NETO2Q8NC67 525 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 COQ8AQ8NI60 647 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 TSPEARQ8WU66 669 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZC3H10Q96K80 434 aaKnown RBP13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 COQ10AQ96MF6 247 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 RBCK1Q9BYM8 510 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 ACTR8Q9H981 624 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 ALG5Q9Y673 324 aa13.99□□□□□ -0.17
SYNGAP1-203ENST00000428982 MLYCDO95822 493 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ANXA3P12429 323 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 CPN2P22792 545 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZNF273Q14593 569 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZNF124Q15973 351 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ESRP1Q6NXG1 681 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 PTP4A1Q93096 173 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 RPL10LQ96L21 214 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 HSD17B1P14061 328 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 LAG3P18627 525 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 RORAP35398 523 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 MXD1Q05195 221 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 PPIGQ13427 754 aaKnown RBP eCLIP13.98□□□□□ -0.172e-7■■■■□ 22.3
SYNGAP1-203ENST00000428982 SYT6Q5T7P8 510 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 TRIM54Q9BYV2 358 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZNF768Q9H5H4 540 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZNF624Q9P2J8 865 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 MAGED1Q9Y5V3 778 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 HSPE1-MOB4S4R3N1 261 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 KIAA0513O60268 411 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 ITGB1P05556 798 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 EFEMP1Q12805 493 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 USP51Q70EK9 711 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 NKAPQ8N5F7 415 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 EFHBQ8N7U6 833 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 RTL3Q8N8U3 475 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 KCT2Q8NC54 265 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 GPR156Q8NFN8 814 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 SSX3Q99909 188 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 SDHAF3Q9NRP4 125 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 PHF11Q9UIL8 331 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 IKZF3Q9UKT9 509 aa13.98□□□□□ -0.17
SYNGAP1-203ENST00000428982 CHURC1-FNTBB4DL54 471 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 FABP7O15540 132 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 NDUFA2O43678 99 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CD1EP15812 388 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 S100PP25815 95 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 HLA-DMAP28067 261 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 LBX1P52954 281 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 DCDC1P59894 354 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SEMA3BQ13214 749 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SP140Q13342 867 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 C2CD4AQ8NCU7 369 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 DPYSL5Q9BPU6 564 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 C8orf33Q9H7E9 229 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 MEAF6Q9HAF1 191 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 AMBNQ9NP70 447 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 ACOT13Q9NPJ3 140 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 MRPL17Q9NRX2 175 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CD300AQ9UGN4 299 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 KPNA3O00505 521 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 ZP3P21754 424 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SSTR2P30874 369 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC1A2P43004 574 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 ATP13A5Q4VNC0 1218 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 FAM180BQ6P0A1 224 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CLEC20AQ6ZU45 233 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 OR5K1Q8NHB7 308 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SPPL2BQ8TCT7 592 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 EXOC2Q96KP1 924 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SDHAF2Q9NX18 166 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CACNG4Q9UBN1 327 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 TLL1O43897 1013 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 FGBP02675 491 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SLC35E2BP0CK96 405 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 DNASE1P24855 282 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 IDH2P48735 452 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 CXCR3P49682 368 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 IL18Q14116 193 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 DDI2Q5TDH0 399 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 SYPL2Q5VXT5 272 aa13.97□□□□□ -0.17
SYNGAP1-203ENST00000428982 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms