RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CDC14CA4D256 554 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ESPNB1AK53 854 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 AGRPO00253 132 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 HAT1O14929 419 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 FOXS1O43638 330 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 DPM1O60762 260 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CLEC3AO75596 197 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 STK16O75716 305 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 FAM155BO75949 473 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 KLHL2O95198 593 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 UMODP07911 640 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ZGLP1P0C6A0 271 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CCDC166P0CW27 439 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SMIM10L1P0DMW3 83 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF10P21506 573 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ALAS2P22557 587 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 BCL6P41182 706 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 PIK3CGP48736 1102 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 AGTR2P50052 363 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SERPINB8P50452 374 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NAA20P61599 178 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CYP4F2P78329 520 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 RGS1Q08116 209 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CDC16Q13042 620 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 MYBPC3Q14896 1274 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TSNQ15631 228 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ADPRMQ3LIE5 342 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 LCN10Q6JVE6 187 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 JMJD6Q6NYC1 403 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 C16orf46Q6P387 395 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 KLC3Q6P597 504 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TMEM205Q6UW68 189 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NXPE4Q6UWF7 544 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TIFABQ6ZNK6 161 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 FRA10AC1Q70Z53 315 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF605Q86T29 641 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ASPGQ86U10 573 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TAX1BP1Q86VP1 789 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 THOC6Q86W42 341 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 GPSM1Q86YR5 675 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CTAGE3PQ8IX95 158 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 KRT78Q8N1N4 520 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 AMER3Q8N944 861 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NOA1Q8NC60 698 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SRFBP1Q8NEF9 429 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SLC13A3Q8WWT9 602 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NEIL2Q969S2 332 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ABHD17AQ96GS6 310 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SMIM10Q96HG1 83 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ATOH8Q96SQ7 321 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NPLQ9BXD5 320 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ATG10Q9H0Y0 220 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 RHBGQ9H310 441 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CDC42EP4Q9H3Q1 356 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ATP13A2Q9NQ11 1180 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 ACSS2Q9NR19 701 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 P4HTMQ9NXG6 502 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NINJ2Q9NZG7 142 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 SLC17A6Q9P2U8 582 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
SMC1A-203ENST00000428014 TNPO3Q9Y5L0 923 aaKnown RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 NBASA2RRP1 2371 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 HMX2A2RU54 273 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 BLACEA4D250 179 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 CDC7O00311 574 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SOCS6O14544 535 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF500O60304 480 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 CNOT3O75175 753 aaKnown RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 H2AFYO75367 372 aaKnown RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 HPP00738 406 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 C2P06681 752 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 INHBAP08476 426 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 RBP1P09455 135 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 C1GALT1C1LP0DN25 315 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PRKAR1AP10644 381 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 FBLP22087 321 aaKnown RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 STXBP1P61764 594 aaKnown RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SLC7A5Q01650 507 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 BIKQ13323 160 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 LY6DQ14210 128 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 NAA30Q147X3 362 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PCBP2Q15366 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 TERF2Q15554 542 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 TRADDQ15628 312 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 KCTD19Q17RG1 926 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PAGE2BQ5JRK9 111 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 MLIPQ5VWP3 458 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 LYPD8Q6UX82 237 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SLCO4C1Q6ZQN7 724 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ABHD13Q7L211 337 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PPP1R32Q7Z5V6 425 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 CCDC25Q86WR0 208 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms