RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DPAGT1Q9H3H5 408 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SMOC2Q9H3U7 446 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 NXF3Q9H4D5 531 aaKnown RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASB7Q9H672 318 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SOX17Q9H6I2 414 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 AKTIPQ9H8T0 292 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 NMUR1Q9HB89 426 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 JPH1Q9HDC5 661 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CASS4Q9NQ75 786 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRDM5Q9NQX1 630 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CISHQ9NSE2 258 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMLHEQ9NVH6 421 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CLN6Q9NWW5 311 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPHK1Q9NYA1 384 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 GGA3Q9NZ52 723 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBP1Q9NZI7 540 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SH3BP4Q9P0V3 963 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 KLHL8Q9P2G9 620 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 MYEF2Q9P2K5 600 aaKnown RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 TINAGQ9UJW2 476 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF222Q9UK12 451 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CORO2BQ9UQ03 480 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 POFUT2Q9Y2G5 429 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PADI2Q9Y2J8 665 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC6A5Q9Y345 797 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SAMHD1Q9Y3Z3 626 aaKnown RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PSAT1Q9Y617 370 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 STYXL1Q9Y6J8 313 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 AHDC1Q5TGY3 1603 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF541Q9H0D2 1346 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARID2Q68CP9 1835 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 A0A1B0GTQ1 180 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 C17orf113A0A1B0GUU1 675 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CARNS1A5YM72 827 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASB14A6NK59 587 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF729A6NN14 1252 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 A8MT66 165 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 D6RAR5 112 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRR23D1E9PI22 279 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 H7C0S8 307 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 L7N2F9 121 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 QSOX1O00391 747 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACKR2O00590 384 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PDCD5O14737 125 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 AKR7A2O43488 359 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHP2O43745 196 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 EIF1BO60739 113 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPP1R11O60927 126 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RGS11O94810 467 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GLUD1P00367 558 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 IFNA10P01566 189 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FABP3P05413 133 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 LCKP06239 509 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FGF2P09038 288 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 FBP1P09467 338 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRR23D2P0DMB1 279 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GAAP10253 952 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 UROSP10746 265 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 IL2RBP14784 551 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPB1P15086 417 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF250P15622 560 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 UGT2B7P16662 529 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB3BP20337 219 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 WARSP23381 471 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 AKAP5P24588 427 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 HRH2P25021 359 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PAX6P26367 422 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CALCRP30988 508 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GKP32189 559 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GGT2P36268 569 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPAM1P38567 509 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RFC3P40938 356 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 EIF2S3P41091 472 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MNDAP41218 407 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 EIF1P41567 113 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CASP2P42575 452 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNJ5P48544 419 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 RNF144AP50876 292 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 EFNA5P52803 228 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARPP19P56211 112 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 C1QTNF8P60827 252 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SNRPD2P62316 118 aaKnown RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 PITPNAQ00169 270 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 IRF9Q00978 393 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CREMQ03060 361 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 YWHAHQ04917 246 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 LRRC74AQ0VAA2 488 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SREBF2Q12772 1141 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 NPRL3Q12980 569 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 CAMK2GQ13555 558 aaPredicted RBP5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GRM3Q14832 879 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 VEPH1Q14D04 833 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ETFDHQ16134 617 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 SSX2Q16385 188 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 MICBQ29980 383 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF699Q32M78 642 aa5.43□□□□□ -1.54
VTI1BP4-201ENST00000427516 GTDC1Q4AE62 458 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms