RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 CYTH2Q99418 400 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 TUBB6Q9BUF5 446 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 VN1R1Q9GZP7 353 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 NTNG1Q9Y2I2 539 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 PSAT1Q9Y617 370 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 DOPEY2Q9Y3R5 2298 aa16.81■□□□□ 0.28
HDLBP-212ENST00000426343 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 ANKUB1A6NFN9 424 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 SGK494L7N484 410 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 WFS1O76024 890 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 DDAH2O95865 285 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 SLC35G6P0C7Q6 338 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 ZNF37AP17032 561 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-212ENST00000426343 IL10P22301 178 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 EFNA3P52797 238 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 CDC16Q13042 620 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 PWP1Q13610 501 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 FASTKD3Q14CZ7 662 aaKnown RBP16.8■□□□□ 0.28
HDLBP-212ENST00000426343 RPUSD3Q6P087 351 aaKnown RBP16.8■□□□□ 0.28
HDLBP-212ENST00000426343 PRSS41Q7RTY9 318 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 HAS2Q92819 552 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 CNDP1Q96KN2 507 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 PTGFRNQ9P2B2 879 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 IKZF3Q9UKT9 509 aa16.8■□□□□ 0.28
HDLBP-212ENST00000426343 USP9YO00507 2555 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-212ENST00000426343 PCM1Q15154 2024 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 DYTNA2CJ06 578 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 FAM187AA6NFU0 413 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 FANCGO15287 622 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 OR1F1O43749 312 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 JRKO75564 520 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 GUCA1CO95843 209 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 IL1RNP18510 177 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 SAT1P21673 171 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 XCR1P46094 333 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 TAS2R39P59534 338 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 ARG2P78540 354 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 ELOAQ14241 798 aaKnown RBP16.79■□□□□ 0.28
HDLBP-212ENST00000426343 CSHL1Q14406 222 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 HERC3Q15034 1050 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 PPP1R3AQ16821 1122 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 MAATS1Q7Z4T9 603 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 PDSS2Q86YH6 399 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 ZBED8Q8IZ13 594 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 AFAP1L2Q8N4X5 818 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 CATSPER1Q8NEC5 780 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 SLC5A11Q8WWX8 675 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 ERP44Q9BS26 406 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 RHOJQ9H4E5 214 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 HCN3Q9P1Z3 774 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 WHRNQ9P202 907 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 C19orf25Q9UFG5 118 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-212ENST00000426343 SHANK1Q9Y566 2161 aa16.79■□□□□ 0.28
HDLBP-212ENST00000426343 AHRP35869 848 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 SKP1P63208 163 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 CDKL1Q00532 357 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 MINDY4Q4G0A6 757 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 NIPAL1Q6NVV3 410 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 CPEB2Q7Z5Q1 589 aaKnown RBP16.78■□□□□ 0.28
HDLBP-212ENST00000426343 SIRT6Q8N6T7 355 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 ST6GALNAC3Q8NDV1 305 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 ZCCHC10Q8TBK6 192 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 PYROXD1Q8WU10 500 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 NEIL2Q969S2 332 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 VPS39Q96JC1 886 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 MCMBPQ9BTE3 642 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 POPDC3Q9HBV1 291 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 NAALAD2Q9Y3Q0 740 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 DYRK1BQ9Y463 629 aa16.78■□□□□ 0.28
HDLBP-212ENST00000426343 TRAV17A0A0B4J275 112 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 CDC7O00311 574 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 EIF3HO15372 352 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDLBP-212ENST00000426343 NDUFS4O43181 175 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 RDH16O75452 317 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 CELA2AP08217 269 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 ITGAMP11215 1152 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 SCTRP47872 440 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 AGTR2P50052 363 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 HNMTP50135 292 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 TNFSF10P50591 281 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 MEF2AQ02078 507 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-212ENST00000426343 RGS1Q08116 209 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 CALCOCO2Q13137 446 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 CATSPEREQ5SY80 951 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 MFSD4BQ5TF39 518 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 PLAG1Q6DJT9 500 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 CYS1Q717R9 158 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.28
HDLBP-212ENST00000426343 ZNF740Q8NDX6 193 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 PLPP5Q8NEB5 264 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 SPATA4Q8NEY3 305 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 OR1N1Q8NGS0 311 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 NT5CQ8TCD5 201 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 GRHL3Q8TE85 626 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 FAR1Q8WVX9 515 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 OR1F2PQ96R84 312 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 RNF32Q9H0A6 362 aa16.77■□□□□ 0.28
HDLBP-212ENST00000426343 PELI2Q9HAT8 420 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms