RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CNTNAP3Q9BZ76 1288 aa23.33■■□□□ 1.33
VEGFA-209ENST00000425836 LHX9Q9NQ69 397 aa23.33■■□□□ 1.33
VEGFA-209ENST00000425836 TXLNGQ9NUQ3 528 aa23.33■■□□□ 1.33
VEGFA-209ENST00000425836 UGDHO60701 494 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 KLK3P07288 261 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-209ENST00000425836 CCNYL3P0C7X3 344 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 TSPAN8P19075 237 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 CCNG1P51959 295 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 CYP4F2P78329 520 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 CLCQ05315 142 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 PWP1Q13610 501 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 PCLAFQ15004 111 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 HIST2H2ACQ16777 129 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-209ENST00000425836 HIST2H2AA3Q6FI13 130 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 GRHL2Q6ISB3 625 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 ZNF517Q6ZMY9 492 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-209ENST00000425836 L3MBTL4Q8NA19 623 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 TRPV3Q8NET8 790 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 PROKR1Q8TCW9 393 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 TRPC4APQ8TEL6 797 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 TLCD1Q96CP7 247 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 GBP5Q96PP8 586 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 CDK15Q96Q40 435 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 DPH1Q9BZG8 443 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 RNF11Q9Y3C5 154 aa23.32■■□□□ 1.32
VEGFA-209ENST00000425836 DSCR3O14972 297 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 NDUFS4O43181 175 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SERPIND1P05546 499 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 HNF4AP41235 474 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 ETV4P43268 484 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 ATP1A2P50993 1020 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SNRPNP63162 240 aaKnown RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 TRAF3Q13114 568 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MUM1Q2TAK8 710 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MANEAQ5SRI9 462 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 GARNL3Q5VVW2 1013 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 LCN10Q6JVE6 187 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 FAM199XQ6PEV8 388 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MYLK4Q86YV6 388 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 DTWD1Q8N5C7 304 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 CCNYL1Q8N7R7 359 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 KCT2Q8NC54 265 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 TTLQ8NG68 377 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 NT5CQ8TCD5 201 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 CREB3L4Q8TEY5 395 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MR1Q95460 341 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 DCBLD2Q96PD2 775 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 HEATR5BQ9P2D3 2071 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 A0A1B0GTL3 188 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 A0A1B0GX78 115 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 KLK10O43240 276 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SASH3O75995 380 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 CLDN9O95484 217 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SLC35G6P0C7Q6 338 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 STAT5AP42229 794 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 NAGLUP54802 743 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MAGOHP61326 146 aaKnown RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 ABHD18Q0P651 414 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MPP2Q14168 576 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 LIPMQ5VYY2 423 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 ADNP2Q6IQ32 1131 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 TMEM214Q6NUQ4 689 aaKnown RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MED27Q6P2C8 311 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 VN1R5Q7Z5H4 357 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 LAS2Q8IYD9 372 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 IL22RA1Q8N6P7 574 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 ARL8AQ96BM9 186 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SEC16BQ96JE7 1060 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 RHBGQ9H310 441 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 KCNK9Q9NPC2 374 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 NDOR1Q9UHB4 597 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 MRPS2Q9Y399 296 aaKnown RBP23.31■■□□□ 1.32
VEGFA-209ENST00000425836 SDK2Q58EX2 2172 aa23.31■■□□□ 1.32
VEGFA-209ENST00000425836 LOC101059948A0A1B0GTJ6 334 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 RRP8O43159 456 aaKnown RBP23.3■■□□□ 1.32
VEGFA-209ENST00000425836 PRPF4O43172 522 aaKnown RBP eCLIP23.3■■□□□ 1.325e-8■■■□□ 16
VEGFA-209ENST00000425836 ITGAXP20702 1163 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 GSTM2P28161 218 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 ALDH3A1P30838 453 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 RBBP7Q16576 425 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 AGBL2Q5U5Z8 902 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 MILR1Q7Z6M3 343 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 OR7G3Q8NG95 312 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 UBE2E3Q969T4 207 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 DPH2Q9BQC3 489 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-209ENST00000425836 CHST8Q9H2A9 424 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 GSTO2Q9H4Y5 243 aa23.3■■□□□ 1.32
VEGFA-209ENST00000425836 OTCP00480 354 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 ARL1P40616 181 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-209ENST00000425836 DCDP81605 110 aaKnown RBP23.29■■□□□ 1.32
VEGFA-209ENST00000425836 RGS1Q08116 209 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 HYAL2Q12891 473 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 CPSF6Q16630 551 aaKnown RBP eCLIP23.29■■□□□ 1.32
VEGFA-209ENST00000425836 NDUFA9Q16795 377 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 SPACA3Q8IXA5 215 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 OR4F6Q8NGB9 312 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 MECRQ9BV79 373 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 SLC6A16Q9GZN6 736 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 WDR70Q9NW82 654 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 ZNF225Q9UK10 706 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms