RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ALCAMQ13740 583 aa2.54□□□□□ -2
VPS41-206ENST00000418457 RASA2Q15283 850 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TRADDQ15628 312 aa2.54□□□□□ -2
VPS41-206ENST00000418457 SLC15A2Q16348 729 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MEP1AQ16819 746 aa2.54□□□□□ -2
VPS41-206ENST00000418457 KNOP1Q1ED39 458 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 ZNF672Q499Z4 452 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 ACCSLQ4AC99 568 aa2.54□□□□□ -2
VPS41-206ENST00000418457 HERC4Q5GLZ8 1057 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 C12orf60Q5U649 245 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ZDHHC20Q5W0Z9 365 aa2.54□□□□□ -2
VPS41-206ENST00000418457 OR7E24Q6IFN5 339 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PPP1R2P3Q6NXS1 205 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CCDC137Q6PK04 289 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 PLEKHM3Q6ZWE6 761 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ADGRA1Q86SQ6 560 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ERICH1Q86X53 443 aa2.54□□□□□ -2
VPS41-206ENST00000418457 NBPF5PQ86XG9 351 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 VSIG1Q86XK7 387 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DZIP1Q86YF9 867 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 MCEMP1Q8IX19 187 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MUC20Q8N307 709 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 RFLNBQ8N5W9 214 aa2.54□□□□□ -2
VPS41-206ENST00000418457 POC5Q8NA72 575 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DRAXINQ8NBI3 349 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 FBXO25Q8TCJ0 367 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MIPOL1Q8TD10 442 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LRRC15Q8TF66 581 aa2.54□□□□□ -2
VPS41-206ENST00000418457 U2AF1L4Q8WU68 220 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 SCFD1Q8WVM8 642 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DNAJC9Q8WXX5 260 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CD101Q93033 1021 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ITFG2Q969R8 447 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PPP1R14BQ96C90 147 aa2.54□□□□□ -2
VPS41-206ENST00000418457 SNF8Q96H20 258 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LMLNQ96KR4 655 aa2.54□□□□□ -2
VPS41-206ENST00000418457 FAM81BQ96LP2 452 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TTC25Q96NG3 672 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DACH2Q96NX9 599 aa2.54□□□□□ -2
VPS41-206ENST00000418457 OLFM3Q96PB7 478 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TGS1Q96RS0 853 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 DDOQ99489 341 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PLIN2Q99541 437 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PKP4Q99569 1192 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GFI1Q99684 422 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PAIP2Q9BPZ3 127 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 TRIM51Q9BSJ1 452 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TIPINQ9BVW5 301 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TEX12Q9BXU0 123 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PITPNM3Q9BZ71 974 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TRIM4Q9C037 500 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MIS12Q9H081 205 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MMADHCQ9H3L0 296 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 LRRC19Q9H756 370 aa2.54□□□□□ -2
VPS41-206ENST00000418457 SUDS3Q9H7L9 328 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 TLE6Q9H808 572 aa2.54□□□□□ -2
VPS41-206ENST00000418457 FKRPQ9H9S5 495 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ZNF556Q9HAH1 456 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DMAP1Q9NPF5 467 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 SAR1AQ9NR31 198 aa2.54□□□□□ -2
VPS41-206ENST00000418457 KLHL1Q9NR64 748 aa2.54□□□□□ -2
VPS41-206ENST00000418457 OLFML3Q9NRN5 406 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PLSCR4Q9NRQ2 329 aa2.54□□□□□ -2
VPS41-206ENST00000418457 FGFR1OP2Q9NVK5 253 aa2.54□□□□□ -2
VPS41-206ENST00000418457 NDUFA13Q9P0J0 144 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ADAM22Q9P0K1 906 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GCNT4Q9P109 453 aa2.54□□□□□ -2
VPS41-206ENST00000418457 UVRAGQ9P2Y5 699 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DNAJB4Q9UDY4 337 aa2.54□□□□□ -2
VPS41-206ENST00000418457 FETUBQ9UGM5 382 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DDX25Q9UHL0 483 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 LNPEPQ9UIQ6 1025 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PCDHGB4Q9UN71 923 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TMEM5Q9Y2B1 443 aa2.54□□□□□ -2
VPS41-206ENST00000418457 B3GALT5Q9Y2C3 310 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DLGAP4Q9Y2H0 992 aa2.54□□□□□ -2
VPS41-206ENST00000418457 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.54□□□□□ -2
VPS41-206ENST00000418457 L3MBTL1Q9Y468 752 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LRP12Q9Y561 859 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ASB3Q9Y575 518 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 BAZ2BQ9UIF8 2168 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 DOT1LQ8TEK3 1739 aa2.54□□□□□ -2
VPS41-206ENST00000418457 UTRNP46939 3433 aa2.53□□□□□ -2
VPS41-206ENST00000418457 ZCWPW2A0A1B0GU75 182 aa2.53□□□□□ -2
VPS41-206ENST00000418457 A0A1W2PS18 150 aa2.53□□□□□ -2
VPS41-206ENST00000418457 OR2A25A4D2G3 310 aa2.53□□□□□ -2
VPS41-206ENST00000418457 FAM47DPA6NHR8 397 aa2.53□□□□□ -2
VPS41-206ENST00000418457 ANKRD66B4E2M5 251 aa2.53□□□□□ -2
VPS41-206ENST00000418457 C16orf97H3BN30 126 aa2.53□□□□□ -2
VPS41-206ENST00000418457 TMEM178BH3BS89 294 aa2.53□□□□□ -2
VPS41-206ENST00000418457 TMEM189-UBE2V1I3L0A0 370 aa2.53□□□□□ -2
VPS41-206ENST00000418457 J3QR06 171 aa2.53□□□□□ -2
VPS41-206ENST00000418457 MPHOSPH10O00566 681 aaKnown RBP2.53□□□□□ -2
VPS41-206ENST00000418457 NVLO15381 856 aaKnown RBP2.53□□□□□ -2
VPS41-206ENST00000418457 CYTH3O43739 400 aa2.53□□□□□ -2
VPS41-206ENST00000418457 NMT2O60551 498 aa2.53□□□□□ -2
VPS41-206ENST00000418457 CCDC22O60826 627 aa2.53□□□□□ -2
VPS41-206ENST00000418457 PEX11AO75192 247 aa2.53□□□□□ -2
VPS41-206ENST00000418457 TBCAO75347 108 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms