RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC16A8O95907 504 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 CCDC166P0CW27 439 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 SSTR2P30874 369 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 DCDP81605 110 aaKnown RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 CDSNQ15517 529 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 SF1Q15637 639 aaKnown RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 DEFB110Q30KQ9 67 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 ALKBH8Q96BT7 664 aaKnown RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 PAFAH2Q99487 392 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 MIPEPQ99797 713 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 SPRTNQ9H040 489 aaPredicted RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 ATG10Q9H0Y0 220 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 SLC22A11Q9NSA0 550 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 SUCOQ9UBS9 1254 aaKnown RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 MAP1AP78559 2803 aaPredicted RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 A0A087WUV0 522 aaPredicted RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 EIF3FO00303 357 aaPredicted RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 MATN2O00339 956 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 CCL21O00585 134 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 SOCS6O14544 535 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 KDM1AO60341 852 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 STMN1P16949 149 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 GRIA3P42263 894 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 GABRA4P48169 554 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 PNLIPRP1P54315 467 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 IRF9Q00978 393 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 DLG1Q12959 904 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 NAB1Q13506 487 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 TSNQ15631 228 aaKnown RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 RPUSD3Q6P087 351 aaKnown RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 TRMT10CQ7L0Y3 403 aaKnown RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 GPR135Q8IZ08 494 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 MAGEC3Q8TD91 643 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 NR4A3Q92570 626 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 FUT8Q9BYC5 575 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 PARVBQ9HBI1 364 aa17.09■□□□□ 0.33
VCP-202ENST00000417448 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.09■□□□□ 0.33
VCP-202ENST00000417448 A0A0J9YY10 115 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 OR2B3O76000 313 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 C8GP07360 202 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 MAGP20916 626 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 GCAP28676 217 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 IMPA1P29218 277 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 MSH2P43246 934 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 RAB10P61026 200 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 ADORA2A-AS1P86434 159 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 SRSF11Q05519 484 aaKnown RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 Q0VFX4 171 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 CSHL1Q14406 222 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 KIR2DS3Q14952 304 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 C18orf21Q32NC0 220 aaPredicted RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 NKAIN1Q4KMZ8 207 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 GFRALQ6UXV0 394 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 LINC00696Q6ZRV3 163 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 MMP21Q8N119 569 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 NKAPQ8N5F7 415 aaKnown RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 PROKR1Q8TCW9 393 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 MCOLN3Q8TDD5 553 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 DCAKDQ8WVC6 231 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 TSPAN17Q96FV3 270 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 MAGEB10Q96LZ2 347 aaPredicted RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 EPS8L2Q9H6S3 715 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 SPATA7Q9P0W8 599 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 STOX2Q9P2F5 926 aaPredicted RBP17.08■□□□□ 0.32
VCP-202ENST00000417448 SH3BGRL2Q9UJC5 107 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 AP1M2Q9Y6Q5 423 aa17.08■□□□□ 0.32
VCP-202ENST00000417448 EXOC1LA0A1B0GW35 172 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 E7ENX8 843 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 KLHL18O94889 574 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 SHBGP04278 402 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 INHBAP08476 426 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 SLC35E2BP0CK96 405 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 ITGAXP20702 1163 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 CAPN3P20807 821 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 MMP11P24347 488 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 CA7P43166 264 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 TAP2Q03519 686 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 OR4D1Q15615 310 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 ZKSCAN8Q15776 578 aaPredicted RBP17.07■□□□□ 0.32
VCP-202ENST00000417448 SLC5A12Q1EHB4 618 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 FBXO48Q5FWF7 155 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 SBSNQ6UWP8 590 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 RPTNQ6XPR3 784 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 LRRC56Q8IYG6 542 aaPredicted RBP17.07■□□□□ 0.32
VCP-202ENST00000417448 RAB42Q8N4Z0 105 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 C19orf47Q8N9M1 422 aaKnown RBP17.07■□□□□ 0.32
VCP-202ENST00000417448 FBXO15Q8NCQ5 510 aaPredicted RBP17.07■□□□□ 0.32
VCP-202ENST00000417448 OR1N1Q8NGS0 311 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 OR2A1Q8NGT9 310 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
VCP-202ENST00000417448 CTNNAL1Q9UBT7 734 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 SH2B3Q9UQQ2 575 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 HS3ST3B1Q9Y662 390 aa17.07■□□□□ 0.32
VCP-202ENST00000417448 ACANP16112 2415 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms