RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PADI2Q9Y2J8 665 aa22■■□□□ 1.11
SMARCB1-205ENST00000417137 ASB1Q9Y576 335 aa22■■□□□ 1.11
SMARCB1-205ENST00000417137 COPEO14579 308 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 ONECUT2O95948 504 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 RECKO95980 971 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 SERPIND1P05546 499 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 F8A1P23610 371 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 EEF1DP29692 281 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 CRHR1P34998 444 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 GTF2H2Q13888 395 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 DOC2AQ14183 400 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 ARHGAP40Q5TG30 622 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 GTF2H2CQ6P1K8 395 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 C16orf46Q6P387 395 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 SNRNP27Q8WVK2 155 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 STARD8Q92502 1023 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 UBE2E3Q969T4 207 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 COL26A1Q96A83 441 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 C10orf90Q96M02 699 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 DRC3Q9H069 523 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 SPNS1Q9H2V7 528 aa21.99■■□□□ 1.11
SMARCB1-205ENST00000417137 DMXL2Q8TDJ6 3036 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 DSPP15924 2871 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 URADA6NGE7 173 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 FOXO6A8MYZ6 492 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 P2RX6O15547 441 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 NDUFS4O43181 175 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 ATP5F1P24539 256 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 AVPR1BP47901 424 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 NCF4Q15080 339 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 CCDC153Q494R4 210 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 CRTC2Q53ET0 693 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 FAM198BQ6UWH4 519 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 GPR155Q7Z3F1 870 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 SLC22A9Q8IVM8 553 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 ENDOVQ8N8Q3 282 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 NT5CQ8TCD5 201 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 FKBP10Q96AY3 582 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 ACTL8Q9H568 366 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 PRORYQ9H606 182 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 COPG2Q9UBF2 871 aa21.98■■□□□ 1.11
SMARCB1-205ENST00000417137 ANKDD1BA6NHY2 528 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 E2F3O00716 465 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 CREG1O75629 220 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 WFS1O76024 890 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SIX3O95343 332 aaPredicted RBP21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 ALBP02768 609 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 STATHP02808 62 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 CAPN1P07384 714 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SBK3P0C264 359 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 EPORP19235 508 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 HPDP32754 393 aaPredicted RBP21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SLC18A2Q05940 514 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 KRT71Q3SY84 523 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 TMEM214Q6NUQ4 689 aaKnown RBP21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 OVCH1Q7RTY7 1134 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 GOLGA7Q7Z5G4 137 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SYVN1Q86TM6 617 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 TRABD2AQ86V40 505 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 IQCKQ8N0W5 287 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 ANKRD53Q8N9V6 530 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 ATP6V1E2Q96A05 226 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 CCDC126Q96EE4 140 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 MACROD1Q9BQ69 325 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 IQCGQ9H095 443 aaKnown RBP21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 IPPKQ9H8X2 491 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SLC22A7Q9Y694 548 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 HEATR5BQ9P2D3 2071 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 SPTBP11277 2137 aa21.97■■□□□ 1.11
SMARCB1-205ENST00000417137 LRRC14BA6NHZ5 514 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 A8MT66 165 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 UGDHO60701 494 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 SERPINA6P08185 405 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ATXN8OSP0DMR3 200 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 WT1P19544 449 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 HNF4AP41235 474 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 OR1D4P47884 311 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 SKP1P63208 163 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 NFKB2Q00653 900 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ZNF844Q08AG5 666 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 E2F2Q14209 437 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 HERC3Q15034 1050 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 LIPJQ5W064 366 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 NIPAL1Q6NVV3 410 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 C4orf33Q8N1A6 199 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ARHGEF39Q8N4T4 335 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 KCT2Q8NC54 265 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 MMABQ96EY8 250 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ACTR8Q9H981 624 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ANKHQ9HCJ1 492 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 PRM3Q9NNZ6 103 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 TCFL5Q9UL49 500 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 MRPS18BQ9Y676 258 aaKnown RBP21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 MAU2Q9Y6X3 613 aa21.96■■□□□ 1.11
SMARCB1-205ENST00000417137 ANKRD11Q6UB99 2663 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 RGS16O15492 202 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 PRAMEF4O60810 478 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 MED26O95402 600 aa21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 FBLP22087 321 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-205ENST00000417137 STXBP1P61764 594 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 707.2 ms