RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 ARHGAP10A1A4S6 786 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SERTM1A2A2V5 107 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 E9PBE3 544 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TXNDC9O14530 226 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ZNF195O14628 629 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TOX3O15405 576 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 NDUFS4O43181 175 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 KLHL41O60662 606 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 CCDC22O60826 627 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 PEX11AO75192 247 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SEC22BO75396 215 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 RFPL3O75679 317 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TGFB1P01137 390 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 C9P02748 559 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 EIF2S1P05198 315 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 JUNP05412 331 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 SPTBP11277 2137 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 NCF2P19878 526 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 PTX3P26022 381 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 CD1CP29017 333 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 BCL6P41182 706 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 LSSP48449 732 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ACADVLP49748 655 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ERVK-8P63133 956 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 HSD11B2P80365 405 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 HMGCS1Q01581 520 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 RELAQ04206 551 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ILKQ13418 452 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SQSTM1Q13501 440 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TERF2Q15554 542 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 KIF26BQ2KJY2 2108 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 AP5B1Q2VPB7 878 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 LSM12Q3MHD2 195 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 TMEM35AQ53FP2 167 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SPIN4Q56A73 249 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 XKR7Q5GH72 579 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TOR1AIP1Q5JTV8 583 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 PHF19Q5T6S3 580 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 METTL21CQ5VZV1 264 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TRIM40Q6P9F5 258 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 RNF44Q7L0R7 432 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TRIM46Q7Z4K8 759 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SPATA19Q7Z5L4 167 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 PARP9Q8IXQ6 854 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 FAM9CQ8IZT9 166 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TTC29Q8NA56 475 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 FNDC5Q8NAU1 212 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ZNF740Q8NDX6 193 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SRFBP1Q8NEF9 429 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 OR4D9Q8NGE8 314 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SLC13A3Q8WWT9 602 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 PRR11Q96HE9 360 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 METTL2AQ96IZ6 378 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 MAELQ96JY0 434 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 PPM1MQ96MI6 270 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 QRFPRQ96P65 431 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 OR52B2Q96RD2 323 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 NUDT22Q9BRQ3 303 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 SARGQ9BW04 601 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 MS4A8Q9BY19 250 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 ACPTQ9BZG2 426 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 AKTIPQ9H8T0 292 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 COPS7BQ9H9Q2 264 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 C1orf109Q9NX04 203 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 AKAP7Q9P0M2 348 aaPredicted RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 HEY2Q9UBP5 337 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 PPT2Q9UMR5 302 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 PLCL2Q9UPR0 1127 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 RUVBL1Q9Y265 456 aaKnown RBP8.04□□□□□ -1.12
RBM39-208ENST00000416108 TMED5Q9Y3A6 229 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 KLK4Q9Y5K2 254 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 AP1M2Q9Y6Q5 423 aa8.04□□□□□ -1.12
RBM39-208ENST00000416108 GPR179Q6PRD1 2367 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 A0A088AWK7 358 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 A0A1W2PQM1 296 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 D6RAR5 112 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 H0YGG7 62 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 TMX2-CTNND1H3BSU7 103 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 UBDO15205 165 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 KIF1CO43896 1103 aaKnown RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 LCMT2O60294 686 aaKnown RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 SH3BGRLO75368 114 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 SEMA3DO95025 777 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 SERPINA6P08185 405 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 ZNF10P21506 573 aaPredicted RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 PRPH2P23942 346 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 LIMK1P53667 647 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 VSX2P58304 361 aaPredicted RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 ARF3P61204 181 aaPredicted RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 SKP1P63208 163 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 IRX1P78414 480 aaPredicted RBP8.03□□□□□ -1.12
RBM39-208ENST00000416108 ACY1Q03154 408 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 TRA2AQ13595 282 aaKnown RBP eCLIP8.03□□□□□ -1.126e-14■■■■□ 19.8
RBM39-208ENST00000416108 PWP1Q13610 501 aa8.03□□□□□ -1.12
RBM39-208ENST00000416108 CUL3Q13618 768 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms