RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 NFKB2Q00653 900 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 NAE1Q13564 534 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 FLOT2Q14254 428 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 FASTKQ14296 549 aaKnown RBP13.96□□□□□ -0.17
SGCE-202ENST00000415788 TMEM71Q6P5X7 295 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 KLHDC8AQ8IYD2 350 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 OR4D9Q8NGE8 314 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 SGPP1Q9BX95 441 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 ATG10Q9H0Y0 220 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 POMT2Q9UKY4 750 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 A0A1W2PPV9 198 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 ISM1B1AKI9 464 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 D6RAR5 112 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 CAPN5O15484 640 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRICKLE3O43900 615 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 TRMUO75648 421 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 KCNK5O95279 499 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 HSPA4LO95757 839 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 SLC6A12P48065 614 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRKAA2P54646 552 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PFKFB4Q16877 469 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PTCHD3Q3KNS1 767 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PIGGQ5H8A4 983 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 SPESP1Q6UW49 350 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 ZYG11AQ6WRX3 759 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 USP53Q70EK8 1073 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 RAB44Q7Z6P3 723 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 ERI1Q8IV48 349 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 PGAM4Q8N0Y7 254 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 MED8Q96G25 268 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 CNBD2Q96M20 576 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 NRTNQ99748 197 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 SHCBP1LQ9BZQ2 653 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 SYNDIG1Q9H7V2 258 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 DLL3Q9NYJ7 618 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 GOLGA4Q13439 2230 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRSS51A0A1B0GVH4 220 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 SPAARA0A1B0GVQ0 90 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 STK16O75716 305 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 FTH1P19P0C7X4 201 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PIK3R1P27986 724 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRDX3P30048 256 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 CSF2RBP32927 897 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 NUDT2P50583 147 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 ABATP80404 500 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TSTA3Q13630 321 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
SGCE-202ENST00000415788 SLC5A12Q1EHB4 618 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 CCDC157Q569K6 752 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRAMEF13Q5VWM6 474 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 LRRC70Q7Z2Q7 622 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 C2orf73Q8N5S3 287 aaPredicted RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 LMNTD1Q8N9Z9 388 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 OR2A1Q8NGT9 310 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 OR2A14Q96R47 310 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
SGCE-202ENST00000415788 NUDT22Q9BRQ3 303 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TMEM79Q9BSE2 394 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 CD244Q9BZW8 370 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 SPHK1Q9NYA1 384 aa13.95□□□□□ -0.18
SGCE-202ENST00000415788 TLCD2A6NGC4 264 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 A8MT66 165 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 TAPBPO15533 448 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 BCAS2O75934 225 aaPredicted RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 UGT2B7P16662 529 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 ZNF23P17027 643 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 ME2P23368 584 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 NAA20P61599 178 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 CFHR1Q03591 330 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 TRA2AQ13595 282 aaKnown RBP eCLIP13.94□□□□□ -0.18
SGCE-202ENST00000415788 SF1Q15637 639 aaKnown RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 ZXDCQ2QGD7 858 aaPredicted RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 VWA5B1Q5TIE3 1220 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 SUSD1Q6UWL2 747 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 SLCO6A1Q86UG4 719 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 PTGR2Q8N8N7 351 aaPredicted RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 FLVCR1-AS1Q8TAF5 88 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 TGM7Q96PF1 710 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 RSL24D1Q9UHA3 163 aaKnown RBP13.94□□□□□ -0.18
SGCE-202ENST00000415788 TAC3Q9UHF0 121 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 KCNE2Q9Y6J6 123 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
SGCE-202ENST00000415788 GOLGA8QA0A0J9YX86 632 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 A0A0J9YY10 115 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 GOLGA8OA6NCC3 632 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 GOLGA8NF8WBI6 632 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 SLCO1B7G3V0H7 640 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 G3V2L1 256 aa13.93□□□□□ -0.18
SGCE-202ENST00000415788 DLX3O60479 287 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms